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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031146 through 18771 annotations produced 1 hits



(CG15449):

Annotation Number : CG15449
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031146
Gbrowse : chrX:20910742-20911465 (-) // 100.0 //
Probeset : 1637516_at
Accessions : protein= NP_608423;, nucleotide= NM_134579;
FlyMine data for FBgn0031146.
VDRC has 2 RNAi stocks for FBgn0031146 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain29 ± 24 of 4 2.60Up
Head110 ± 124 of 4 9.60Up
Eye178 ± 94 of 415.55Up
Thoracicoabdominal ganglion13 ± 11 of 4 1.10None
Salivary gland5 ± 30 of 4 0.46None
Crop7 ± 10 of 4 0.70None
Midgut12 ± 00 of 4 1.10None
Tubule19 ± 52 of 4 1.70None
Hindgut50 ± 34 of 4 4.40Up
Heart15 ± 34 of 4 1.38None
Fat body29 ± 54 of 4 2.55Up
Ovary1 ± 00 of 4 0.20Down
Testis33 ± 34 of 4 2.90Up
Male accessory glands4 ± 10 of 4 0.40Down
Virgin spermatheca16 ± 21 of 4 1.45None
Mated spermatheca10 ± 10 of 4 0.94None
Adult carcass32 ± 53 of 4 2.80Up
Larval CNS19 ± 83 of 4 1.69None
Larval Salivary gland4 ± 00 of 4 0.37Down
Larval midgut11 ± 10 of 4 0.96None
Larval tubule3 ± 10 of 4 0.30Down
Larval hindgut11 ± 00 of 4 1.03None
Larval fat body4 ± 20 of 4 0.30Down
Larval trachea6 ± 41 of 4 0.55None
Larval carcass6 ± 11 of 4 0.57None
S2 cells (growing)24 ± 04 of 4 2.16Up
Whole fly11 ± 12 of 4

Looking for FBgn0031146. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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