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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031150 through 18771 annotations produced 1 hits



bves (bves):

Annotation Number : CG32513
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031150
Gbrowse : chrX:20925033-20949972 (+) // 100.0 //
Probeset : 1633387_at
Accessions : protein= NP_608426; /// NP_996523;, nucleotide= NM_134582; /// NM_206800;
Pathway : 0016020 // membrane // inferred from electronic annotation
FlyMine data for FBgn0031150.
VDRC has 3 RNAi stocks for FBgn0031150 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain53 ± 24 of 4 1.10None
Head34 ± 14 of 4 0.70Down
Eye38 ± 44 of 4 0.80None
Thoracicoabdominal ganglion53 ± 34 of 4 1.10None
Salivary gland36 ± 43 of 4 0.75None
Crop89 ± 54 of 4 1.80Up
Midgut34 ± 14 of 4 0.70Down
Tubule89 ± 114 of 4 1.80Up
Hindgut62 ± 24 of 4 1.30Up
Heart24 ± 24 of 4 0.51Down
Fat body27 ± 24 of 4 0.56Down
Ovary145 ± 54 of 4 3.00Up
Testis24 ± 24 of 4 0.50Down
Male accessory glands84 ± 34 of 4 1.70Up
Virgin spermatheca35 ± 44 of 4 0.73None
Mated spermatheca37 ± 64 of 4 0.78None
Adult carcass36 ± 74 of 4 0.80None
Larval CNS98 ± 104 of 4 2.02Up
Larval Salivary gland59 ± 54 of 4 1.23None
Larval midgut27 ± 34 of 4 0.56Down
Larval tubule46 ± 54 of 4 1.00None
Larval hindgut38 ± 34 of 4 0.79Down
Larval fat body37 ± 24 of 4 0.80Down
Larval trachea37 ± 14 of 4 0.78Down
Larval carcass46 ± 34 of 4 0.95None
S2 cells (growing)183 ± 44 of 4 3.76Up
Whole fly48 ± 14 of 4

Looking for FBgn0031150. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime