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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031181 through 18771 annotations produced 1 hits



CG14584 (Ir20a):

Annotation Number : CG14584
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031181
Gbrowse : chrX:21348280-21349972 (-) // 100.0 //
Probeset : 1636086_at
Accessions : protein= NP_608456;, nucleotide= NM_134612;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0031181.
BioGrid reports that CG14584 interacts with CG3808 .
VDRC has 2 RNAi stocks for FBgn0031181 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 1.10None
Head2 10 of 4 2.20None
Eye0 00 of 4 0.54None
Thoracicoabdominal ganglion1 00 of 4 1.00None
Salivary gland5 30 of 4 5.20None
Crop1 10 of 4 1.50None
Midgut1 00 of 4 1.50None
Tubule2 00 of 4 2.00Up
Hindgut2 00 of 4 2.00None
Heart0 00 of 4 0.46None
Fat body3 10 of 4 3.24None
Ovary1 00 of 4 1.10None
Testis2 00 of 4 1.90None
Male accessory glands1 00 of 4 1.50None
Virgin spermatheca1 00 of 4 1.80None
Mated spermatheca2 00 of 4 2.80None
Adult carcass4 20 of 4 4.20None
Larval CNS0 00 of 4 0.66None
Larval Salivary gland2 10 of 4 2.66None
Larval midgut1 00 of 4 1.44None
Larval tubule1 00 of 4 1.00None
Larval hindgut0 00 of 4 0.51None
Larval fat body5 30 of 4 5.70None
Larval trachea1 10 of 4 1.24None
Larval carcass1 00 of 4 1.78None
S2 cells (growing)2 10 of 4 2.85None
Whole fly1 00 of 4

Looking for FBgn0031181. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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