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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031184 through 18771 annotations produced 1 hits



/// (CG14615 /// DsimCG14615):

Annotation Number : CG14615
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031184
Gbrowse : chrX:21849579-21851327 (-) // 100.0 //
Probeset : 1630516_at
Accessions : protein= NP_608459;, nucleotide= NM_134615;
FlyMine data for FBgn0031184.
BDGP gene expression has embryonic in situ data for CG14615: 15 pix of staining in 2 body parts.
VDRC has 2 RNAi stocks for FBgn0031184 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain14 ± 14 of 4 0.20Down
Head42 ± 44 of 4 0.60Down
Eye34 ± 24 of 4 0.46Down
Thoracicoabdominal ganglion12 ± 22 of 4 0.20Down
Salivary gland23 ± 31 of 4 0.31Down
Crop44 ± 54 of 4 0.60Down
Midgut75 ± 44 of 4 1.00None
Tubule48 ± 74 of 4 0.60Down
Hindgut14 ± 14 of 4 0.20Down
Heart657 ± 524 of 4 8.64Up
Fat body567 ± 1164 of 4 7.47Up
Ovary30 ± 14 of 4 0.40Down
Testis8 ± 04 of 4 0.10Down
Male accessory glands23 ± 14 of 4 0.30Down
Virgin spermatheca44 ± 24 of 4 0.58Down
Mated spermatheca38 ± 14 of 4 0.51Down
Adult carcass359 ± 344 of 4 4.70Up
Larval CNS11 ± 34 of 4 0.16Down
Larval Salivary gland5 ± 20 of 4 0.08Down
Larval midgut24 ± 24 of 4 0.32Down
Larval tubule11 ± 03 of 4 0.20Down
Larval hindgut11 ± 23 of 4 0.15Down
Larval fat body12 ± 21 of 4 0.20Down
Larval trachea7 ± 31 of 4 0.09Down
Larval carcass8 ± 21 of 4 0.12Down
S2 cells (growing)19 ± 24 of 4 0.26Down
Whole fly76 ± 44 of 4

Looking for FBgn0031184. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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