FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0031196 through 18771 annotations produced 1 hits

(CG17599):

Annotation Number : CG17599
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031196
Gbrowse : chrX:21944285-21946059 (-) // 100.0 //
Probeset : 1628749_at
Accessions : protein= NP_608470;, nucleotide= NM_134626;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0031196.
BioGrid reports that CG17599 interacts with CG17778 CG5717 CG6856 CG8697 CG9740 CG17660 CG2054 CG2213 CG3922 CG4617 CG4735 CG4898 CG5053 CG5343 CG6497 CG6944 .
VDRC has 2 RNAi stocks for FBgn0031196 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 0	0 of 4	1.80	None
Head	12 ± 1	1 of 4	6.40	Up
Eye	3 ± 0	0 of 4	1.56	None
Thoracicoabdominal ganglion	7 ± 1	0 of 4	3.80	Up
Salivary gland	7 ± 2	0 of 4	3.52	None
Crop	5 ± 2	0 of 4	2.80	None
Midgut	1 ± 1	0 of 4	0.90	None
Tubule	3 ± 0	0 of 4	1.60	Up
Hindgut	3 ± 1	0 of 4	1.60	None
Heart	3 ± 1	0 of 4	1.90	None
Fat body	4 ± 4	0 of 4	2.49	None
Ovary	2 ± 1	0 of 4	1.30	None
Testis	5 ± 1	1 of 4	2.70	None
Male accessory glands	8 ± 2	0 of 4	4.00	None
Virgin spermatheca	4 ± 1	0 of 4	2.19	None
Mated spermatheca	7 ± 2	1 of 4	3.58	None
Adult carcass	16 ± 2	0 of 4	8.30	Up
Larval CNS	3 ± 2	0 of 4	1.59	None
Larval Salivary gland	6 ± 2	0 of 4	3.41	None
Larval midgut	1 ± 0	0 of 4	0.96	None
Larval tubule	4 ± 1	0 of 4	2.50	None
Larval hindgut	3 ± 2	0 of 4	1.99	None
Larval fat body	3 ± 2	0 of 4	2.00	None
Larval trachea	6 ± 1	2 of 4	3.44	Up
Larval carcass	4 ± 2	0 of 4	2.34	None
S2 cells (growing)	7 ± 1	0 of 4	3.71	Up
Whole fly	2 ± 1	0 of 4

Looking for FBgn0031196. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720