Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031208 through 18771 annotations produced 1 hits



(CG11023):

Annotation Number : CG11023
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031208
Gbrowse : chr2L:7528-9491 (+) // 100.0 //
Probeset : 1633327_at
Accessions : protein= NP_001162836; /// NP_787955;, nucleotide= NM_001169365; /// NM_175941;
Interpro : 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity //
FlyMine data for FBgn0031208.
BDGP gene expression has embryonic in situ data for CG11023: 4 pix of staining in 1 body parts.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 10 of 4 0.10Down
Head1 00 of 4 0.00Down
Eye0 00 of 4 0.01Down
Thoracicoabdominal ganglion4 00 of 4 0.10Down
Salivary gland4 20 of 4 0.13Down
Crop3 10 of 4 0.10Down
Midgut1 00 of 4 0.00Down
Tubule2 00 of 4 0.10Down
Hindgut2 10 of 4 0.10Down
Heart0 00 of 4 0.02Down
Fat body3 20 of 4 0.09Down
Ovary4 00 of 4 0.10Down
Testis557 54 of 416.20Up
Male accessory glands2 10 of 4 0.10Down
Virgin spermatheca1 00 of 4 0.03Down
Mated spermatheca1 00 of 4 0.03Down
Adult carcass3 10 of 4 0.10Down
Larval CNS1 10 of 4 0.05Down
Larval Salivary gland4 10 of 4 0.12Down
Larval midgut0 00 of 4 0.02Down
Larval tubule1 00 of 4 0.00Down
Larval hindgut3 10 of 4 0.10Down
Larval fat body74 414 of 4 2.20None
Larval trachea4 30 of 4 0.12Down
Larval carcass3 10 of 4 0.09Down
S2 cells (growing)2 10 of 4 0.06Down
Whole fly34 24 of 4

Looking for FBgn0031208. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime