Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031244 through 18771 annotations produced 1 hits



(CG11601):

Annotation Number : CG11601
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031244
Gbrowse : chr2L:281969-283281 (-) // 100.0 //
Probeset : 1635670_at
Accessions : protein= NP_608513;, nucleotide= NM_134669;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0031244.
BioGrid reports that CG11601 interacts with CG13626 CG13045 .
VDRC has 5 RNAi stocks for FBgn0031244 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain101 ± 54 of 4 0.80Down
Head149 ± 124 of 4 1.20None
Eye167 ± 144 of 4 1.31None
Thoracicoabdominal ganglion124 ± 34 of 4 1.00None
Salivary gland628 ± 174 of 4 4.89Up
Crop677 ± 184 of 4 5.30Up
Midgut324 ± 154 of 4 2.50Up
Tubule442 ± 284 of 4 3.40Up
Hindgut589 ± 104 of 4 4.60Up
Heart175 ± 74 of 4 1.36Up
Fat body157 ± 264 of 4 1.23None
Ovary112 ± 14 of 4 0.90Down
Testis244 ± 84 of 4 1.90Up
Male accessory glands221 ± 144 of 4 1.70Up
Virgin spermatheca185 ± 24 of 4 1.45Up
Mated spermatheca198 ± 44 of 4 1.55Up
Adult carcass174 ± 114 of 4 1.40Up
Larval CNS83 ± 174 of 4 0.65Down
Larval Salivary gland109 ± 84 of 4 0.85None
Larval midgut144 ± 174 of 4 1.12None
Larval tubule175 ± 74 of 4 1.40Up
Larval hindgut117 ± 84 of 4 0.92None
Larval fat body51 ± 34 of 4 0.40Down
Larval trachea101 ± 114 of 4 0.79Down
Larval carcass85 ± 34 of 4 0.67Down
S2 cells (growing)158 ± 64 of 4 1.24Up
Whole fly128 ± 24 of 4

Looking for FBgn0031244. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime