Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031261 through 18771 annotations produced 1 hits



Dbeta3 (nAcRbeta-21C):

Annotation Number : CG11822
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031261
Gbrowse : chr2L:545155-547099 (+) // 100.0 //
Probeset : 1625023_a_at
Accessions : protein= NP_525098; /// NP_722638;, nucleotide= NM_080359; /// NM_164386;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0005892 // nicotinic acetylcholine-gated receptor-
Interpro : 0004872 // receptor activity // inferred from electronic annotation /// 0004889 // nicotinic acetylcholine-activated cat
FlyMine data for FBgn0031261.
BDGP gene expression has embryonic in situ data for nAcRbeta-21C: 40 pix of staining in 3 body parts.
Homophila reports that CG11822 is a close match (5e-11) to human gene GABRB3;ECA5 (NP_000805), a gene associated with Epilepsy, childhood absence, 5, 612269 (3);Insomnia (3).
TRiP has 1 RNAi stocks for FBgn0031261 available for purchase.
VDRC has 3 RNAi stocks for FBgn0031261 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain52 34 of 4 1.40None
Head161 84 of 4 4.20Up
Eye51 94 of 4 1.36None
Thoracicoabdominal ganglion22 23 of 4 0.60Down
Salivary gland18 30 of 4 0.48Down
Crop3 00 of 4 0.10Down
Midgut21 20 of 4 0.60Down
Tubule10 10 of 4 0.30Down
Hindgut7 20 of 4 0.20Down
Heart643 234 of 416.82Up
Fat body28 62 of 4 0.74None
Ovary1 00 of 4 0.00Down
Testis19 24 of 4 0.50Down
Male accessory glands5 20 of 4 0.10Down
Virgin spermatheca12 41 of 4 0.34Down
Mated spermatheca12 31 of 4 0.34Down
Adult carcass162 84 of 4 4.30Up
Larval CNS5 40 of 4 0.14Down
Larval Salivary gland15 30 of 4 0.41Down
Larval midgut6 10 of 4 0.16Down
Larval tubule27 24 of 4 0.70Down
Larval hindgut17 00 of 4 0.46Down
Larval fat body45 64 of 4 1.20None
Larval trachea38 94 of 4 1.00None
Larval carcass72 54 of 4 1.89Up
S2 cells (growing)522 134 of 413.65Up
Whole fly38 24 of 4

Looking for FBgn0031261. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime