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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031267 through 18771 annotations produced 1 hits



Ipk2 (Ipk2):

Annotation Number : CG13688
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031267
Gbrowse : chr2L:573032-574232 (-) // 100.0 //
Probeset : 1628514_at
Accessions : protein= NP_608535;, nucleotide= NM_134691;
Pathway : 0005654 // nucleoplasm // inferred from direct assay
Interpro : 0000823 // inositol trisphosphate 6-kinase activity // inferred from direct assay /// 0005515 // protein binding // infe
FlyMine data for FBgn0031267.
BioGrid reports that CG13688 interacts with CG14538 CG2448 CG6512 CG15003 CG15071 CG32772 CG6773 CG2947 .
TRiP has 1 RNAi stocks for FBgn0031267 available for purchase.
VDRC has 2 RNAi stocks for FBgn0031267 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain66 ± 34 of 4 0.30Down
Head74 ± 14 of 4 0.30Down
Eye84 ± 34 of 4 0.38Down
Thoracicoabdominal ganglion59 ± 24 of 4 0.30Down
Salivary gland83 ± 114 of 4 0.37Down
Crop147 ± 54 of 4 0.70Down
Midgut260 ± 54 of 4 1.20Up
Tubule294 ± 94 of 4 1.30Up
Hindgut161 ± 84 of 4 0.70Down
Heart77 ± 114 of 4 0.35Down
Fat body44 ± 64 of 4 0.20Down
Ovary418 ± 94 of 4 1.90Up
Testis31 ± 14 of 4 0.10Down
Male accessory glands75 ± 34 of 4 0.30Down
Virgin spermatheca70 ± 24 of 4 0.32Down
Mated spermatheca74 ± 54 of 4 0.33Down
Adult carcass76 ± 44 of 4 0.30Down
Larval CNS175 ± 154 of 4 0.79Down
Larval Salivary gland133 ± 74 of 4 0.60Down
Larval midgut107 ± 34 of 4 0.48Down
Larval tubule244 ± 164 of 4 1.10None
Larval hindgut206 ± 164 of 4 0.92None
Larval fat body102 ± 14 of 4 0.50Down
Larval trachea235 ± 224 of 4 1.05None
Larval carcass267 ± 704 of 4 1.20None
S2 cells (growing)470 ± 194 of 4 2.10Up
Whole fly223 ± 74 of 4

Looking for FBgn0031267. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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