Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031270 through 18771 annotations produced 1 hits



(CG13689):

Annotation Number : CG13689
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031270
Gbrowse : chr2L:603111-603339 (+) // 100.0 //
Probeset : 1623728_at
Accessions : protein= NP_608538;, nucleotide= NM_134694;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0031270.
BioGrid reports that CG13689 interacts with CG7144 CG32016 .
VDRC has 2 RNAi stocks for FBgn0031270 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain41 ± 24 of 4 0.80None
Head35 ± 24 of 4 0.70Down
Eye40 ± 04 of 4 0.80Down
Thoracicoabdominal ganglion34 ± 14 of 4 0.70Down
Salivary gland59 ± 34 of 4 1.17None
Crop72 ± 44 of 4 1.40Up
Midgut29 ± 14 of 4 0.60Down
Tubule34 ± 24 of 4 0.70Down
Hindgut42 ± 14 of 4 0.80Down
Heart53 ± 14 of 4 1.06None
Fat body34 ± 34 of 4 0.68Down
Ovary119 ± 14 of 4 2.40Up
Testis7 ± 02 of 4 0.20Down
Male accessory glands55 ± 34 of 4 1.10None
Virgin spermatheca51 ± 24 of 4 1.02None
Mated spermatheca60 ± 44 of 4 1.20None
Adult carcass32 ± 14 of 4 0.60Down
Larval CNS128 ± 64 of 4 2.54Up
Larval Salivary gland37 ± 34 of 4 0.73Down
Larval midgut40 ± 04 of 4 0.81Down
Larval tubule91 ± 24 of 4 1.80Up
Larval hindgut37 ± 14 of 4 0.74Down
Larval fat body61 ± 74 of 4 1.20None
Larval trachea81 ± 14 of 4 1.61Up
Larval carcass42 ± 34 of 4 0.85None
S2 cells (growing)65 ± 14 of 4 1.29Up
Whole fly50 ± 24 of 4

Looking for FBgn0031270. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime