FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0031344 through 18771 annotations produced 1 hits

(CG7420):

Annotation Number : CG7420
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031344
Gbrowse : chr2L:1500834-1502903 (-) // 99.67 //
Probeset : 1628497_at
Accessions : protein= NP_608602;, nucleotide= NM_134758;
FlyMine data for FBgn0031344.
BDGP gene expression has embryonic in situ data for CG7420: 4 pix of staining in 1 body parts.
Homophila reports that CG7420 is a close match (8e-12) to human gene HERC2;SHEP1 (NP_004658), a gene associated with [Skin/hair/eye pigmentation 1, blond/brown hair], 227220 (3);[Skin/hair/eye pigmentation 1, blue/nonblue eyes], 227220 (3).
TRiP has 1 RNAi stocks for FBgn0031344 available for purchase.
VDRC has 3 RNAi stocks for FBgn0031344 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	48 ± 1	4 of 4	0.70	Down
Head	67 ± 8	4 of 4	1.00	None
Eye	50 ± 2	4 of 4	0.77	Down
Thoracicoabdominal ganglion	65 ± 1	4 of 4	1.00	None
Salivary gland	191 ± 6	4 of 4	2.91	Up
Crop	104 ± 0	4 of 4	1.60	Up
Midgut	63 ± 2	4 of 4	1.00	None
Tubule	114 ± 3	4 of 4	1.70	Up
Hindgut	84 ± 3	4 of 4	1.30	Up
Heart	44 ± 2	4 of 4	0.68	Down
Fat body	50 ± 6	4 of 4	0.76	Down
Ovary	89 ± 1	4 of 4	1.40	Up
Testis	14 ± 2	2 of 4	0.20	Down
Male accessory glands	92 ± 11	4 of 4	1.40	None
Virgin spermatheca	58 ± 3	4 of 4	0.89	None
Mated spermatheca	62 ± 5	4 of 4	0.96	None
Adult carcass	73 ± 2	4 of 4	1.10	None
Larval CNS	48 ± 5	4 of 4	0.74	Down
Larval Salivary gland	56 ± 4	4 of 4	0.86	None
Larval midgut	46 ± 2	4 of 4	0.70	Down
Larval tubule	104 ± 6	4 of 4	1.60	Up
Larval hindgut	62 ± 2	4 of 4	0.96	None
Larval fat body	46 ± 1	4 of 4	0.70	Down
Larval trachea	84 ± 3	4 of 4	1.29	Up
Larval carcass	40 ± 1	4 of 4	0.62	Down
S2 cells (growing)	41 ± 2	4 of 4	0.63	Down
Whole fly	65 ± 3	4 of 4

Looking for FBgn0031344. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720