FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0031384 through 18771 annotations produced 2 hits

(CG4238):

Annotation Number : CG4238
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031384
Gbrowse : chr2L:2024042-2029938 (+) // 100.0 //
Probeset : 1638884_at
Accessions : protein= NP_001097052; /// NP_001097053; /// NP_608640;, nucleotide= NM_001103582; /// NM_001103583; /// NM_134796;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0004842 // ubiquitin-protein ligase activity // inferred from sequence or structural similarity /// 0004842 // ubiquitin
FlyMine data for FBgn0031384.
Homophila reports that CG4238 is a close match (8e-12) to human gene HERC2;SHEP1 (NP_004658), a gene associated with [Skin/hair/eye pigmentation 1, blond/brown hair], 227220 (3);[Skin/hair/eye pigmentation 1, blue/nonblue eyes], 227220 (3).
BioGrid reports that CG4238 interacts with CG9511 .
TRiP has 1 RNAi stocks for FBgn0031384 available for purchase.
VDRC has 1 RNAi stocks for FBgn0031384 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	123 ± 5	4 of 4	4.50	Up
Head	23 ± 4	4 of 4	0.80	None
Eye	8 ± 2	3 of 4	0.31	Down
Thoracicoabdominal ganglion	162 ± 9	4 of 4	5.90	Up
Salivary gland	23 ± 1	2 of 4	0.85	None
Crop	18 ± 0	1 of 4	0.70	Down
Midgut	5 ± 2	0 of 4	0.20	Down
Tubule	3 ± 0	0 of 4	0.10	Down
Hindgut	11 ± 1	1 of 4	0.40	Down
Heart	12 ± 1	4 of 4	0.45	Down
Fat body	21 ± 3	2 of 4	0.78	None
Ovary	50 ± 2	4 of 4	1.80	Up
Testis	36 ± 3	4 of 4	1.40	None
Male accessory glands	158 ± 11	4 of 4	5.80	Up
Virgin spermatheca	4 ± 1	0 of 4	0.16	Down
Mated spermatheca	3 ± 1	0 of 4	0.11	Down
Adult carcass	19 ± 0	2 of 4	0.70	None
Larval CNS	17 ± 3	4 of 4	0.65	Down
Larval Salivary gland	3 ± 1	0 of 4	0.11	Down
Larval midgut	3 ± 1	0 of 4	0.13	Down
Larval tubule	2 ± 0	0 of 4	0.10	Down
Larval hindgut	1 ± 0	0 of 4	0.04	Down
Larval fat body	79 ± 7	4 of 4	2.90	Up
Larval trachea	2 ± 2	0 of 4	0.09	Down
Larval carcass	2 ± 0	0 of 4	0.11	Down
S2 cells (growing)	1 ± 0	0 of 4	0.05	Down
Whole fly	27 ± 2	4 of 4

(CG4238):

Annotation Number : Stencil:2L:2010532:2017502:GENSCAN
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031384 /// FBgn0040717
Gbrowse : chr2L:2008867-2015837 (+) // 100.0 //
Probeset : 1636665_at
Accessions : protein= NP_001097052; /// NP_001097053; /// NP_608640;, nucleotide= NM_001103582; /// NM_001103583; /// NM_134796;
Pathway : 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // non-tracea
Interpro : 0004842 // ubiquitin-protein ligase activity // inferred from sequence or structural similarity /// 0004842 // ubiquitin
FlyMine data for FBgn0031384 /// FBgn0040717.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	4.10	None
Head	2 ± 0	0 of 4	1.90	None
Eye	3 ± 1	0 of 4	3.00	None
Thoracicoabdominal ganglion	7 ± 2	0 of 4	7.30	None
Salivary gland	8 ± 4	0 of 4	8.17	None
Crop	4 ± 2	0 of 4	4.70	None
Midgut	3 ± 0	0 of 4	3.50	Up
Tubule	6 ± 1	0 of 4	6.00	Up
Hindgut	3 ± 1	0 of 4	3.30	None
Heart	2 ± 1	0 of 4	2.83	None
Fat body	6 ± 7	0 of 4	6.41	None
Ovary	3 ± 1	0 of 4	2.90	None
Testis	5 ± 1	0 of 4	5.10	None
Male accessory glands	10 ± 3	0 of 4	10.50	None
Virgin spermatheca	11 ± 1	0 of 4	11.39	Up
Mated spermatheca	13 ± 2	0 of 4	13.07	Up
Adult carcass	10 ± 2	0 of 4	10.60	Up
Larval CNS	2 ± 0	0 of 4	2.10	Up
Larval Salivary gland	2 ± 0	0 of 4	2.05	Up
Larval midgut	3 ± 1	0 of 4	2.95	None
Larval tubule	3 ± 0	0 of 4	3.80	Up
Larval hindgut	5 ± 1	0 of 4	5.41	Up
Larval fat body	2 ± 0	0 of 4	2.30	Up
Larval trachea	5 ± 3	0 of 4	5.61	None
Larval carcass	2 ± 0	0 of 4	2.22	None
S2 cells (growing)	2 ± 1	0 of 4	2.37	None
Whole fly	1 ± 0	0 of 4

Looking for FBgn0031384. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720