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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031392 through 18771 annotations produced 1 hits



Apoptosis Inducing Factor (AIF):

Annotation Number : CG7263
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031392
Gbrowse : chr2L:2151663-2155390 (+) // 100.0 //
Probeset : 1626985_a_at
Accessions : protein= NP_608649; /// NP_722765;, nucleotide= NM_134805; /// NM_164456;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electron
Interpro : 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050660 // FAD or FADH2 binding // inferre
FlyMine data for FBgn0031392.
VDRC has 2 RNAi stocks for FBgn0031392 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain191 ± 44 of 4 0.50Down
Head144 ± 74 of 4 0.40Down
Eye90 ± 54 of 4 0.26Down
Thoracicoabdominal ganglion236 ± 34 of 4 0.70Down
Salivary gland128 ± 44 of 4 0.37Down
Crop161 ± 64 of 4 0.50Down
Midgut200 ± 54 of 4 0.60Down
Tubule274 ± 264 of 4 0.80Down
Hindgut200 ± 24 of 4 0.60Down
Heart135 ± 44 of 4 0.39Down
Fat body194 ± 294 of 4 0.56Down
Ovary741 ± 44 of 4 2.10Up
Testis878 ± 174 of 4 2.50Up
Male accessory glands186 ± 114 of 4 0.50Down
Virgin spermatheca222 ± 124 of 4 0.64Down
Mated spermatheca267 ± 94 of 4 0.77Down
Adult carcass122 ± 104 of 4 0.40Down
Larval CNS265 ± 54 of 4 0.76Down
Larval Salivary gland235 ± 84 of 4 0.67Down
Larval midgut143 ± 114 of 4 0.41Down
Larval tubule105 ± 14 of 4 0.30Down
Larval hindgut236 ± 254 of 4 0.68Down
Larval fat body141 ± 384 of 4 0.40Down
Larval trachea175 ± 354 of 4 0.50Down
Larval carcass186 ± 234 of 4 0.53Down
S2 cells (growing)226 ± 24 of 4 0.65Down
Whole fly349 ± 144 of 4

Looking for FBgn0031392. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime