FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0031395 through 18771 annotations produced 2 hits

(CG10874):

Annotation Number : CG10874
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031395
Gbrowse : chr2L:2190706-2192372 (-) // 100.0 //
Probeset : 1638122_a_at
Accessions : protein= NP_608652; /// NP_722768;, nucleotide= NM_134808; /// NM_164458;
FlyMine data for FBgn0031395.
BDGP gene expression has embryonic in situ data for CG10874: 4 pix of staining in 1 body parts.
Homophila reports that CG10874 is a close match (1e-13) to human gene (NP_077272), a gene associated with .
VDRC has 1 RNAi stocks for FBgn0031395 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	39 ± 1	4 of 4	1.70	Up
Head	21 ± 2	4 of 4	1.00	None
Eye	30 ± 2	4 of 4	1.34	None
Thoracicoabdominal ganglion	32 ± 1	4 of 4	1.50	None
Salivary gland	10 ± 3	0 of 4	0.47	None
Crop	26 ± 2	2 of 4	1.20	None
Midgut	2 ± 0	0 of 4	0.10	Down
Tubule	4 ± 1	0 of 4	0.20	Down
Hindgut	17 ± 1	1 of 4	0.80	None
Heart	28 ± 1	4 of 4	1.28	None
Fat body	24 ± 6	4 of 4	1.07	None
Ovary	49 ± 1	4 of 4	2.20	Up
Testis	20 ± 1	2 of 4	0.90	None
Male accessory glands	22 ± 3	2 of 4	1.00	None
Virgin spermatheca	9 ± 1	0 of 4	0.44	Down
Mated spermatheca	8 ± 1	0 of 4	0.36	Down
Adult carcass	24 ± 3	1 of 4	1.10	None
Larval CNS	25 ± 5	4 of 4	1.14	None
Larval Salivary gland	20 ± 2	1 of 4	0.90	None
Larval midgut	7 ± 1	0 of 4	0.33	Down
Larval tubule	26 ± 1	4 of 4	1.20	None
Larval hindgut	13 ± 1	0 of 4	0.58	None
Larval fat body	60 ± 4	4 of 4	2.70	Up
Larval trachea	22 ± 3	4 of 4	1.01	None
Larval carcass	25 ± 2	0 of 4	1.15	None
S2 cells (growing)	43 ± 2	4 of 4	1.92	Up
Whole fly	22 ± 3	3 of 4

(CG10874):

Annotation Number : CG10874
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031395
Gbrowse : chr2L:2189912-2192372 (-) // 100.0 //
Probeset : 1633055_at
Accessions : protein= NP_608652; /// NP_722768;, nucleotide= NM_134808; /// NM_164458;
FlyMine data for FBgn0031395.
BDGP gene expression has embryonic in situ data for CG10874: 4 pix of staining in 1 body parts.
Homophila reports that CG10874 is a close match (1e-13) to human gene (NP_077272), a gene associated with .
VDRC has 1 RNAi stocks for FBgn0031395 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	211 ± 3	4 of 4	1.30	Up
Head	179 ± 5	4 of 4	1.10	Up
Eye	169 ± 3	4 of 4	1.08	Up
Thoracicoabdominal ganglion	199 ± 4	4 of 4	1.30	Up
Salivary gland	126 ± 8	4 of 4	0.80	Down
Crop	150 ± 6	4 of 4	1.00	None
Midgut	100 ± 2	4 of 4	0.60	Down
Tubule	131 ± 4	4 of 4	0.80	Down
Hindgut	110 ± 1	4 of 4	0.70	Down
Heart	225 ± 5	4 of 4	1.43	Up
Fat body	229 ± 23	4 of 4	1.45	Up
Ovary	280 ± 5	4 of 4	1.80	Up
Testis	99 ± 3	4 of 4	0.60	Down
Male accessory glands	171 ± 7	4 of 4	1.10	None
Virgin spermatheca	275 ± 15	4 of 4	1.75	Up
Mated spermatheca	234 ± 15	4 of 4	1.49	Up
Adult carcass	198 ± 8	4 of 4	1.30	Up
Larval CNS	172 ± 6	4 of 4	1.09	Up
Larval Salivary gland	120 ± 4	4 of 4	0.77	Down
Larval midgut	188 ± 13	4 of 4	1.20	None
Larval tubule	183 ± 2	4 of 4	1.20	Up
Larval hindgut	135 ± 8	4 of 4	0.86	None
Larval fat body	729 ± 85	4 of 4	4.60	Up
Larval trachea	136 ± 6	4 of 4	0.86	Down
Larval carcass	197 ± 16	4 of 4	1.25	None
S2 cells (growing)	145 ± 2	4 of 4	0.92	Down
Whole fly	157 ± 2	4 of 4

Looking for FBgn0031395. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720