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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031419 through 18771 annotations produced 1 hits



(CG15390):

Annotation Number : CG15390
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031419
Gbrowse : chr2L:2374688-2375696 (+) // 100.0 //
Probeset : 1635526_at
Accessions : protein= NP_608676;, nucleotide= NM_134832;
FlyMine data for FBgn0031419.
BDGP gene expression has embryonic in situ data for CG15390: 4 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0031419 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain67 ± 64 of 4 2.20Up
Head23 ± 24 of 4 0.80None
Eye17 ± 14 of 4 0.57Down
Thoracicoabdominal ganglion74 ± 44 of 4 2.50Up
Salivary gland18 ± 51 of 4 0.61None
Crop13 ± 23 of 4 0.40Down
Midgut10 ± 10 of 4 0.30Down
Tubule14 ± 03 of 4 0.50Down
Hindgut11 ± 11 of 4 0.40Down
Heart14 ± 14 of 4 0.47Down
Fat body22 ± 14 of 4 0.74Down
Ovary82 ± 44 of 4 2.70Up
Testis14 ± 14 of 4 0.50Down
Male accessory glands9 ± 21 of 4 0.30Down
Virgin spermatheca22 ± 34 of 4 0.74None
Mated spermatheca21 ± 24 of 4 0.72None
Adult carcass19 ± 20 of 4 0.60Down
Larval CNS32 ± 34 of 4 1.08None
Larval Salivary gland22 ± 04 of 4 0.74Down
Larval midgut16 ± 13 of 4 0.54Down
Larval tubule11 ± 11 of 4 0.40Down
Larval hindgut18 ± 24 of 4 0.62Down
Larval fat body17 ± 10 of 4 0.60Down
Larval trachea19 ± 34 of 4 0.63Down
Larval carcass20 ± 34 of 4 0.69None
S2 cells (growing)18 ± 04 of 4 0.61Down
Whole fly30 ± 14 of 4

Looking for FBgn0031419. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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