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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031464 through 18771 annotations produced 1 hits



Dual oxidase (Duox):

Annotation Number : CG3131
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031464
Gbrowse : chr2L:2816005-2821305 (-) // 100.0 //
Probeset : 1636572_at
Accessions : protein= NP_608715;, nucleotide= NM_134871;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0004601 // peroxidase activity // inferred from direct assay /// 0004601 // peroxidase activity // inferred from electro
FlyMine data for FBgn0031464.
Homophila reports that CG3131 is a close match (4e-30) to human gene TPO;TPX (NP_783653), a gene associated with Goiter, congenital (3);Hyperthyroidism, congenital (3);Thyroid hormone organification defect IIA, 274500 (3);Total iodide organification defect, 274500 (3).
TRiP has 4 RNAi stocks for FBgn0031464 available for purchase.
VDRC has 1 RNAi stocks for FBgn0031464 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain6 ± 02 of 4 0.10Down
Head22 ± 14 of 4 0.20Down
Eye11 ± 13 of 4 0.10Down
Thoracicoabdominal ganglion8 ± 22 of 4 0.10Down
Salivary gland6 ± 20 of 4 0.06Down
Crop30 ± 14 of 4 0.30Down
Midgut2 ± 00 of 4 0.00Down
Tubule8 ± 10 of 4 0.10Down
Hindgut10 ± 14 of 4 0.10Down
Heart8 ± 21 of 4 0.07Down
Fat body8 ± 20 of 4 0.08Down
Ovary271 ± 44 of 4 2.40Up
Testis9 ± 13 of 4 0.10Down
Male accessory glands7 ± 20 of 4 0.10Down
Virgin spermatheca34 ± 44 of 4 0.30Down
Mated spermatheca44 ± 84 of 4 0.38Down
Adult carcass69 ± 54 of 4 0.60Down
Larval CNS33 ± 34 of 4 0.29Down
Larval Salivary gland20 ± 13 of 4 0.17Down
Larval midgut8 ± 30 of 4 0.08Down
Larval tubule7 ± 30 of 4 0.10Down
Larval hindgut149 ± 154 of 4 1.30None
Larval fat body6 ± 20 of 4 0.10Down
Larval trachea226 ± 94 of 4 1.97Up
Larval carcass180 ± 84 of 4 1.57Up
S2 cells (growing)6 ± 02 of 4 0.06Down
Whole fly114 ± 94 of 4

Looking for FBgn0031464. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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