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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031479 through 18771 annotations produced 1 hits



Peroxiredoxin 6005 (Prx6005):

Annotation Number : CG3083
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031479
Gbrowse : chr2L:2877090-2878149 (-) // 100.0 //
Probeset : 1634107_at
Accessions : protein= NP_523463;, nucleotide= NM_078739;
Pathway : 0005829 // cytosol // inferred from direct assay
Interpro : 0004601 // peroxidase activity // non-traceable author statement /// 0004601 // peroxidase activity // inferred from ele
FlyMine data for FBgn0031479.
VDRC has 2 RNAi stocks for FBgn0031479 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain85 ± 44 of 4 0.70Down
Head160 ± 114 of 4 1.20None
Eye81 ± 44 of 4 0.63Down
Thoracicoabdominal ganglion115 ± 44 of 4 0.90None
Salivary gland116 ± 94 of 4 0.91None
Crop109 ± 44 of 4 0.80Down
Midgut195 ± 54 of 4 1.50Up
Tubule114 ± 84 of 4 0.90None
Hindgut165 ± 24 of 4 1.30Up
Heart127 ± 34 of 4 0.99None
Fat body155 ± 304 of 4 1.21None
Ovary210 ± 34 of 4 1.60Up
Testis104 ± 34 of 4 0.80Down
Male accessory glands167 ± 164 of 4 1.30None
Virgin spermatheca156 ± 84 of 4 1.21None
Mated spermatheca159 ± 64 of 4 1.23Up
Adult carcass90 ± 84 of 4 0.70Down
Larval CNS294 ± 154 of 4 2.28Up
Larval Salivary gland204 ± 134 of 4 1.58Up
Larval midgut97 ± 51 of 4 0.76Down
Larval tubule154 ± 34 of 4 1.20Up
Larval hindgut169 ± 64 of 4 1.31Up
Larval fat body143 ± 74 of 4 1.10None
Larval trachea235 ± 184 of 4 1.83Up
Larval carcass153 ± 44 of 4 1.19Up
S2 cells (growing)266 ± 44 of 4 2.07Up
Whole fly129 ± 64 of 4

Looking for FBgn0031479. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime