FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0031530 through 18771 annotations produced 2 hits

polypeptide GalNAc transferase 2 (pgant2):

Annotation Number : Stencil:2L:3400942:3400146:GENSCAN
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031530
Gbrowse : chr2L:3407577-3408373 (-) // 100.0 //
Probeset : 1639881_at
Accessions : protein= NP_608773;, nucleotide= NM_134929;
Pathway : 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electro
Interpro : "0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from direct assay /// 0004653 // polypept
FlyMine data for FBgn0031530.
BDGP gene expression has embryonic in situ data for CG3254: 19 pix of staining in 4 body parts.
VDRC has 2 RNAi stocks for FBgn0031530 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	12 ± 1	4 of 4	2.40	Up
Head	10 ± 1	2 of 4	1.90	None
Eye	7 ± 1	1 of 4	1.40	None
Thoracicoabdominal ganglion	10 ± 2	2 of 4	1.90	None
Salivary gland	20 ± 2	0 of 4	3.93	Up
Crop	7 ± 1	0 of 4	1.40	None
Midgut	11 ± 3	2 of 4	2.10	None
Tubule	6 ± 0	0 of 4	1.20	None
Hindgut	6 ± 0	0 of 4	1.20	None
Heart	2 ± 0	0 of 4	0.40	None
Fat body	7 ± 4	0 of 4	1.34	None
Ovary	2 ± 0	0 of 4	0.40	None
Testis	3 ± 1	0 of 4	0.60	None
Male accessory glands	5 ± 2	0 of 4	1.00	None
Virgin spermatheca	5 ± 1	0 of 4	0.98	None
Mated spermatheca	3 ± 1	0 of 4	0.63	None
Adult carcass	11 ± 2	1 of 4	2.10	None
Larval CNS	8 ± 1	2 of 4	1.58	None
Larval Salivary gland	5 ± 1	0 of 4	1.10	None
Larval midgut	11 ± 0	1 of 4	2.08	Up
Larval tubule	13 ± 1	4 of 4	2.40	Up
Larval hindgut	1 ± 0	0 of 4	0.22	None
Larval fat body	3 ± 1	0 of 4	0.60	None
Larval trachea	3 ± 2	0 of 4	0.72	None
Larval carcass	8 ± 1	0 of 4	1.53	None
S2 cells (growing)	8 ± 0	0 of 4	1.67	None
Whole fly	5 ± 1	0 of 4

polypeptide GalNAc transferase 2 (pgant2):

Annotation Number : CG3254
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031530
Gbrowse : chr2L:3404459-3407570 (-) // 100.0 //
Probeset : 1639535_at
Accessions : protein= NP_608773;, nucleotide= NM_134929;
Pathway : 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electro
Interpro : "0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from direct assay /// 0004653 // polypept
FlyMine data for FBgn0031530.
BDGP gene expression has embryonic in situ data for CG3254: 19 pix of staining in 4 body parts.
Homophila reports that CG3254 is a close match (3e-101) to human gene GALNT3;HFTC;HHS (NP_004473), a gene associated with Hyperostosis-hyperphosphatemia syndrome, 610233 (3);Tumoral calcinosis, hyperphosphatemic, familial, 211900 (3).
VDRC has 2 RNAi stocks for FBgn0031530 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	336 ± 14	4 of 4	10.50	Up
Head	190 ± 20	4 of 4	6.00	Up
Eye	166 ± 11	4 of 4	5.22	Up
Thoracicoabdominal ganglion	305 ± 12	4 of 4	9.60	Up
Salivary gland	37 ± 4	4 of 4	1.18	None
Crop	20 ± 2	4 of 4	0.60	Down
Midgut	129 ± 3	4 of 4	4.00	Up
Tubule	199 ± 14	4 of 4	6.30	Up
Hindgut	33 ± 2	4 of 4	1.10	None
Heart	15 ± 0	4 of 4	0.48	Down
Fat body	19 ± 4	4 of 4	0.61	Down
Ovary	7 ± 1	4 of 4	0.20	Down
Testis	10 ± 1	4 of 4	0.30	Down
Male accessory glands	33 ± 6	4 of 4	1.00	None
Virgin spermatheca	23 ± 2	4 of 4	0.74	None
Mated spermatheca	22 ± 1	4 of 4	0.70	None
Adult carcass	15 ± 3	2 of 4	0.50	Down
Larval CNS	228 ± 30	4 of 4	7.16	Up
Larval Salivary gland	19 ± 2	4 of 4	0.60	Down
Larval midgut	221 ± 10	4 of 4	6.95	Up
Larval tubule	158 ± 4	4 of 4	5.00	Up
Larval hindgut	54 ± 3	4 of 4	1.70	Up
Larval fat body	5 ± 1	0 of 4	0.20	Down
Larval trachea	63 ± 6	4 of 4	2.00	Up
Larval carcass	392 ± 74	4 of 4	12.30	Up
S2 cells (growing)	51 ± 4	4 of 4	1.62	Up
Whole fly	31 ± 3	4 of 4

Looking for FBgn0031530. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720