FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0031536 through 18771 annotations produced 1 hits

CG3248 (Cog3):

Annotation Number : CG3248
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031536
Gbrowse : chr2L:3453696-3457058 (-) // 100.0 //
Probeset : 1629650_at
Accessions : protein= NP_608779;, nucleotide= NM_134935;
Pathway : 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electro
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // inferred
FlyMine data for FBgn0031536.
BDGP gene expression has embryonic in situ data for CG3248: 10 pix of staining in 4 body parts.
BioGrid reports that CG3248 interacts with CG7558 .
VDRC has 3 RNAi stocks for FBgn0031536 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	77 ± 0	4 of 4	1.00	None
Head	55 ± 3	4 of 4	0.70	Down
Eye	64 ± 4	4 of 4	0.83	None
Thoracicoabdominal ganglion	106 ± 3	4 of 4	1.40	Up
Salivary gland	199 ± 13	4 of 4	2.54	Up
Crop	95 ± 7	4 of 4	1.20	None
Midgut	83 ± 3	4 of 4	1.10	None
Tubule	76 ± 1	4 of 4	1.00	None
Hindgut	83 ± 3	4 of 4	1.10	None
Heart	56 ± 3	4 of 4	0.73	Down
Fat body	71 ± 9	4 of 4	0.92	None
Ovary	121 ± 5	4 of 4	1.50	Up
Testis	59 ± 5	4 of 4	0.80	Down
Male accessory glands	187 ± 9	4 of 4	2.40	Up
Virgin spermatheca	84 ± 8	4 of 4	1.07	None
Mated spermatheca	90 ± 3	4 of 4	1.15	None
Adult carcass	57 ± 5	4 of 4	0.70	Down
Larval CNS	70 ± 3	4 of 4	0.90	None
Larval Salivary gland	341 ± 17	4 of 4	4.35	Up
Larval midgut	68 ± 4	4 of 4	0.87	None
Larval tubule	120 ± 10	4 of 4	1.50	Up
Larval hindgut	100 ± 5	4 of 4	1.28	Up
Larval fat body	55 ± 10	4 of 4	0.70	None
Larval trachea	63 ± 5	4 of 4	0.81	Down
Larval carcass	86 ± 4	4 of 4	1.10	None
S2 cells (growing)	101 ± 0	4 of 4	1.29	Up
Whole fly	78 ± 3	4 of 4

Looking for FBgn0031536. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720