FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0031564 through 18771 annotations produced 1 hits

(CG2816):

Annotation Number : CG2816
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031564
Gbrowse : chr2L:3703579-3704038 (+) // 100.0 //
Probeset : 1636605_at
Accessions : protein= NP_608803;, nucleotide= NM_134959;
Interpro : 0004867 // serine-type endopeptidase inhibitor activity // inferred from sequence or structural similarity /// 0004867 /
FlyMine data for FBgn0031564.
TRiP has 1 RNAi stocks for FBgn0031564 available for purchase.
VDRC has 1 RNAi stocks for FBgn0031564 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	7 ± 1	1 of 4	0.30	Down
Head	42 ± 3	4 of 4	1.80	Up
Eye	17 ± 1	4 of 4	0.74	None
Thoracicoabdominal ganglion	7 ± 1	0 of 4	0.30	Down
Salivary gland	48 ± 13	2 of 4	2.09	None
Crop	26 ± 2	3 of 4	1.10	None
Midgut	3 ± 1	0 of 4	0.20	Down
Tubule	12 ± 1	0 of 4	0.50	Down
Hindgut	58 ± 2	4 of 4	2.50	Up
Heart	16 ± 1	4 of 4	0.71	Down
Fat body	32 ± 7	3 of 4	1.40	None
Ovary	4 ± 0	0 of 4	0.20	Down
Testis	1 ± 0	0 of 4	0.10	Down
Male accessory glands	184 ± 21	4 of 4	8.00	Up
Virgin spermatheca	23 ± 3	3 of 4	1.01	None
Mated spermatheca	25 ± 5	4 of 4	1.08	None
Adult carcass	72 ± 3	4 of 4	3.10	Up
Larval CNS	19 ± 2	4 of 4	0.83	None
Larval Salivary gland	43 ± 3	4 of 4	1.87	Up
Larval midgut	16 ± 2	3 of 4	0.70	None
Larval tubule	11 ± 2	1 of 4	0.50	Down
Larval hindgut	122 ± 6	4 of 4	5.27	Up
Larval fat body	54 ± 15	4 of 4	2.40	None
Larval trachea	1030 ± 238	4 of 4	44.40	Up
Larval carcass	139 ± 16	4 of 4	6.03	Up
S2 cells (growing)	3 ± 0	0 of 4	0.16	Down
Whole fly	23 ± 2	2 of 4

Looking for FBgn0031564. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720