Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031564 through 18771 annotations produced 1 hits



(CG2816):

Annotation Number : CG2816
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031564
Gbrowse : chr2L:3703579-3704038 (+) // 100.0 //
Probeset : 1636605_at
Accessions : protein= NP_608803;, nucleotide= NM_134959;
Interpro : 0004867 // serine-type endopeptidase inhibitor activity // inferred from sequence or structural similarity /// 0004867 /
FlyMine data for FBgn0031564.
TRiP has 1 RNAi stocks for FBgn0031564 available for purchase.
VDRC has 1 RNAi stocks for FBgn0031564 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 11 of 4 0.30Down
Head42 34 of 4 1.80Up
Eye17 14 of 4 0.74None
Thoracicoabdominal ganglion7 10 of 4 0.30Down
Salivary gland48 132 of 4 2.09None
Crop26 23 of 4 1.10None
Midgut3 10 of 4 0.20Down
Tubule12 10 of 4 0.50Down
Hindgut58 24 of 4 2.50Up
Heart16 14 of 4 0.71Down
Fat body32 73 of 4 1.40None
Ovary4 00 of 4 0.20Down
Testis1 00 of 4 0.10Down
Male accessory glands184 214 of 4 8.00Up
Virgin spermatheca23 33 of 4 1.01None
Mated spermatheca25 54 of 4 1.08None
Adult carcass72 34 of 4 3.10Up
Larval CNS19 24 of 4 0.83None
Larval Salivary gland43 34 of 4 1.87Up
Larval midgut16 23 of 4 0.70None
Larval tubule11 21 of 4 0.50Down
Larval hindgut122 64 of 4 5.27Up
Larval fat body54 154 of 4 2.40None
Larval trachea1030 2384 of 444.40Up
Larval carcass139 164 of 4 6.03Up
S2 cells (growing)3 00 of 4 0.16Down
Whole fly23 22 of 4

Looking for FBgn0031564. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime