FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0031601 through 18771 annotations produced 1 hits

CG3058 (Dim1):

Annotation Number : CG3058
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031601
Gbrowse : chr2L:4403254-4403955 (+) // 100.0 //
Probeset : 1627900_at
Accessions : protein= NP_608830;, nucleotide= NM_134986;
Pathway : via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing
Interpro : via spliceosome // inferred from sequence or structural similarity /// 0007052 // mitotic spindle organization // infer
FlyMine data for FBgn0031601.
BDGP gene expression has embryonic in situ data for CG3058: 10 pix of staining in 3 body parts.
BioGrid reports that CG3058 interacts with CG7716 CG8925 .
VDRC has 3 RNAi stocks for FBgn0031601 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	212 ± 3	4 of 4	1.40	Up
Head	122 ± 4	4 of 4	0.80	None
Eye	168 ± 3	4 of 4	1.15	None
Thoracicoabdominal ganglion	279 ± 12	4 of 4	1.90	Up
Salivary gland	219 ± 4	4 of 4	1.49	Up
Crop	95 ± 5	4 of 4	0.60	Down
Midgut	202 ± 8	4 of 4	1.40	Up
Tubule	131 ± 3	4 of 4	0.90	Down
Hindgut	118 ± 1	4 of 4	0.80	None
Heart	119 ± 4	4 of 4	0.81	None
Fat body	105 ± 4	4 of 4	0.72	Down
Ovary	193 ± 2	4 of 4	1.30	Up
Testis	161 ± 8	4 of 4	1.10	None
Male accessory glands	122 ± 5	4 of 4	0.80	None
Virgin spermatheca	106 ± 3	4 of 4	0.72	Down
Mated spermatheca	105 ± 3	4 of 4	0.72	Down
Adult carcass	97 ± 7	4 of 4	0.70	Down
Larval CNS	244 ± 22	4 of 4	1.66	Up
Larval Salivary gland	128 ± 7	4 of 4	0.87	None
Larval midgut	116 ± 5	4 of 4	0.80	None
Larval tubule	203 ± 6	4 of 4	1.40	Up
Larval hindgut	91 ± 5	4 of 4	0.62	Down
Larval fat body	140 ± 7	4 of 4	1.00	None
Larval trachea	174 ± 9	4 of 4	1.19	None
Larval carcass	94 ± 6	4 of 4	0.64	Down
S2 cells (growing)	130 ± 2	4 of 4	0.89	None
Whole fly	146 ± 10	4 of 4

Looking for FBgn0031601. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720