FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0031604 through 18771 annotations produced 1 hits

elongator protein 3 (Elp3):

Annotation Number : CG15433
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031604
Gbrowse : chr2L:4444731-4446771 (+) // 100.0 //
Probeset : 1625244_at
Accessions : protein= NP_608834;, nucleotide= NM_134990;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structur
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity /
FlyMine data for FBgn0031604.
BDGP gene expression has embryonic in situ data for CG15433: 13 pix of staining in 23 body parts.
TRiP has 1 RNAi stocks for FBgn0031604 available for purchase.
VDRC has 2 RNAi stocks for FBgn0031604 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	63 ± 1	4 of 4	0.60	Down
Head	52 ± 4	4 of 4	0.50	Down
Eye	41 ± 2	4 of 4	0.43	Down
Thoracicoabdominal ganglion	49 ± 2	4 of 4	0.50	Down
Salivary gland	61 ± 6	4 of 4	0.62	Down
Crop	63 ± 3	4 of 4	0.60	Down
Midgut	49 ± 3	4 of 4	0.50	Down
Tubule	38 ± 4	4 of 4	0.40	Down
Hindgut	61 ± 6	4 of 4	0.60	Down
Heart	63 ± 1	4 of 4	0.65	Down
Fat body	72 ± 6	4 of 4	0.73	Down
Ovary	170 ± 3	4 of 4	1.70	Up
Testis	42 ± 3	4 of 4	0.40	Down
Male accessory glands	74 ± 0	4 of 4	0.80	Down
Virgin spermatheca	28 ± 1	4 of 4	0.29	Down
Mated spermatheca	38 ± 2	4 of 4	0.40	Down
Adult carcass	66 ± 6	4 of 4	0.70	Down
Larval CNS	89 ± 3	4 of 4	0.91	None
Larval Salivary gland	103 ± 5	4 of 4	1.05	None
Larval midgut	28 ± 5	4 of 4	0.29	Down
Larval tubule	31 ± 2	4 of 4	0.30	Down
Larval hindgut	50 ± 4	4 of 4	0.52	Down
Larval fat body	30 ± 4	4 of 4	0.30	Down
Larval trachea	72 ± 6	4 of 4	0.74	Down
Larval carcass	55 ± 6	4 of 4	0.56	Down
S2 cells (growing)	210 ± 4	4 of 4	2.14	Up
Whole fly	98 ± 7	4 of 4

Looking for FBgn0031604. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720