FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0031628 through 18771 annotations produced 1 hits

(CG3294):

Annotation Number : CG3294
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031628
Gbrowse : chr2L:4794548-4796576 (+) // 100.0 //
Probeset : 1631181_a_at
Accessions : protein= NP_608857; /// NP_787976;, nucleotide= NM_135013; /// NM_175962;
Pathway : via spliceosome // inferred from sequence or structural similarity"
Interpro : 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from sequence
FlyMine data for FBgn0031628.
BioGrid reports that CG3294 interacts with CG4877 CG5064 CG7757 CG3295 CG5546 CG6843 CG9213 CG33133 .
TRiP has 1 RNAi stocks for FBgn0031628 available for purchase.
VDRC has 2 RNAi stocks for FBgn0031628 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	56 ± 1	4 of 4	2.50	Up
Head	25 ± 1	4 of 4	1.10	None
Eye	41 ± 4	4 of 4	1.82	Up
Thoracicoabdominal ganglion	45 ± 1	4 of 4	2.00	Up
Salivary gland	24 ± 4	1 of 4	1.07	None
Crop	21 ± 0	4 of 4	0.90	None
Midgut	23 ± 1	4 of 4	1.00	None
Tubule	22 ± 1	3 of 4	1.00	None
Hindgut	24 ± 1	4 of 4	1.10	None
Heart	14 ± 1	4 of 4	0.65	Down
Fat body	21 ± 2	3 of 4	0.93	None
Ovary	21 ± 1	4 of 4	0.90	None
Testis	16 ± 1	4 of 4	0.70	Down
Male accessory glands	28 ± 0	4 of 4	1.20	Up
Virgin spermatheca	26 ± 1	4 of 4	1.18	None
Mated spermatheca	21 ± 1	4 of 4	0.96	None
Adult carcass	20 ± 4	1 of 4	0.90	None
Larval CNS	61 ± 5	4 of 4	2.73	Up
Larval Salivary gland	19 ± 0	3 of 4	0.84	None
Larval midgut	16 ± 2	1 of 4	0.73	None
Larval tubule	19 ± 1	4 of 4	0.80	None
Larval hindgut	19 ± 1	4 of 4	0.84	None
Larval fat body	20 ± 1	2 of 4	0.90	None
Larval trachea	28 ± 7	4 of 4	1.26	None
Larval carcass	14 ± 2	2 of 4	0.62	Down
S2 cells (growing)	23 ± 0	4 of 4	1.04	None
Whole fly	22 ± 1	4 of 4

Looking for FBgn0031628. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720