FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0031629 through 18771 annotations produced 1 hits

(CG3244):

Annotation Number : CG3244
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031629
Gbrowse : chr2L:4796583-4801923 (-) // 100.0 //
Probeset : 1638365_at
Accessions : protein= NP_608858;, nucleotide= NM_135014;
Interpro : 0005488 // binding // inferred from electronic annotation /// 0005529 // sugar binding // inferred from electronic annot
FlyMine data for FBgn0031629.
BDGP gene expression has embryonic in situ data for CG3244: 15 pix of staining in 4 body parts.
BioGrid reports that CG3244 interacts with CG3929 CG5099 CG6172 CG6945 .
VDRC has 2 RNAi stocks for FBgn0031629 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	13 ± 0	2 of 4	0.10	Down
Head	741 ± 60	4 of 4	4.10	Up
Eye	288 ± 3	4 of 4	1.59	Up
Thoracicoabdominal ganglion	20 ± 3	4 of 4	0.10	Down
Salivary gland	204 ± 16	4 of 4	1.13	None
Crop	1459 ± 77	4 of 4	8.10	Up
Midgut	82 ± 5	4 of 4	0.50	Down
Tubule	9 ± 0	0 of 4	0.10	Down
Hindgut	790 ± 37	4 of 4	4.40	Up
Heart	33 ± 6	4 of 4	0.19	Down
Fat body	47 ± 10	3 of 4	0.26	Down
Ovary	5 ± 0	0 of 4	0.00	Down
Testis	2 ± 1	0 of 4	0.00	Down
Male accessory glands	13 ± 3	0 of 4	0.10	Down
Virgin spermatheca	167 ± 14	4 of 4	0.92	None
Mated spermatheca	275 ± 23	4 of 4	1.52	Up
Adult carcass	746 ± 60	4 of 4	4.10	Up
Larval CNS	32 ± 17	4 of 4	0.18	Down
Larval Salivary gland	158 ± 6	4 of 4	0.87	None
Larval midgut	116 ± 10	4 of 4	0.64	Down
Larval tubule	11 ± 4	2 of 4	0.10	Down
Larval hindgut	1192 ± 73	4 of 4	6.58	Up
Larval fat body	14 ± 3	0 of 4	0.10	Down
Larval trachea	2670 ± 282	4 of 4	14.74	Up
Larval carcass	4173 ± 325	4 of 4	23.03	Up
S2 cells (growing)	2 ± 1	0 of 4	0.01	Down
Whole fly	181 ± 11	4 of 4

Looking for FBgn0031629. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720