FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0031650 through 18771 annotations produced 1 hits

(CG14044):

Annotation Number : CG14044
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031650
Gbrowse : chr2L:4942747-4944305 (+) // 100.0 //
Probeset : 1633900_at
Accessions : protein= NP_608879;, nucleotide= NM_135035;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0031650.
BioGrid reports that CG14044 interacts with CG2925 CG3560 CG8746 CG14641 CG15069 CG15370 CG15646 CG1888 CG2260 CG3032 CG3140 CG32171 CG3758 CG4237 CG4328 CG4617 CG4717 CG5441 CG7810 CG8493 CG9541 CG9972 Dmel CG14425 .
VDRC has 1 RNAi stocks for FBgn0031650 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	21 ± 1	4 of 4	57.20	Up
Head	6 ± 0	1 of 4	17.10	Up
Eye	2 ± 1	0 of 4	7.13	None
Thoracicoabdominal ganglion	32 ± 1	4 of 4	86.70	Up
Salivary gland	2 ± 1	0 of 4	6.00	None
Crop	0 ± 0	0 of 4	1.20	None
Midgut	0 ± 0	0 of 4	1.20	None
Tubule	1 ± 0	0 of 4	3.60	Up
Hindgut	1 ± 0	0 of 4	3.50	None
Heart	4 ± 1	0 of 4	12.20	None
Fat body	0 ± 0	0 of 4	1.33	None
Ovary	0 ± 0	0 of 4	1.70	None
Testis	0 ± 0	0 of 4	2.50	None
Male accessory glands	0 ± 0	0 of 4	1.90	Up
Virgin spermatheca	0 ± 0	0 of 4	1.27	None
Mated spermatheca	0 ± 0	0 of 4	1.60	None
Adult carcass	1 ± 0	0 of 4	4.30	None
Larval CNS	3 ± 2	0 of 4	8.80	None
Larval Salivary gland	5 ± 1	0 of 4	15.40	Up
Larval midgut	0 ± 0	0 of 4	1.73	None
Larval tubule	1 ± 0	0 of 4	3.10	None
Larval hindgut	0 ± 0	0 of 4	0.80	None
Larval fat body	2 ± 1	0 of 4	5.90	None
Larval trachea	2 ± 1	0 of 4	6.67	Up
Larval carcass	1 ± 0	0 of 4	3.73	None
S2 cells (growing)	0 ± 0	0 of 4	2.60	None
Whole fly	0 ± 0	0 of 4

Looking for FBgn0031650. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720