Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031654 through 18771 annotations produced 1 hits



Jonah 25B (Jon25Bii):

Annotation Number : CG8869
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031654
Gbrowse : chr2L:4952249-4953134 (-) // 100.0 //
Probeset : 1639196_at
Accessions : protein= NP_608882;, nucleotide= NM_135038;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity /
FlyMine data for FBgn0031654.
BDGP gene expression has embryonic in situ data for CG8869: 4 pix of staining in 1 body parts.
Homophila reports that CG8869 is a close match (4e-11) to human gene MTSP1;ST14 (NP_068813), a gene associated with Ichthyosis with hypotrichosis, 610765 (3).
VDRC has 4 RNAi stocks for FBgn0031654 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 ± 10 of 4 0.00Down
Head8 ± 10 of 4 0.00Down
Eye8 ± 40 of 4 0.01Down
Thoracicoabdominal ganglion4 ± 00 of 4 0.00Down
Salivary gland27 ± 40 of 4 0.02Down
Crop8 ± 20 of 4 0.00Down
Midgut4896 ± 1704 of 4 3.50Up
Tubule16 ± 00 of 4 0.00Down
Hindgut16 ± 20 of 4 0.00Down
Heart4 ± 10 of 4 0.00Down
Fat body18 ± 50 of 4 0.01Down
Ovary5 ± 20 of 4 0.00Down
Testis5 ± 30 of 4 0.00Down
Male accessory glands11 ± 30 of 4 0.00Down
Virgin spermatheca6 ± 20 of 4 0.00Down
Mated spermatheca9 ± 30 of 4 0.01Down
Adult carcass23 ± 90 of 4 0.00Down
Larval CNS8 ± 10 of 4 0.01Down
Larval Salivary gland3 ± 10 of 4 0.00Down
Larval midgut4993 ± 1994 of 4 3.52Up
Larval tubule24 ± 30 of 4 0.00Down
Larval hindgut25 ± 20 of 4 0.02Down
Larval fat body62 ± 321 of 4 0.00Down
Larval trachea83 ± 1431 of 4 0.06Down
Larval carcass4 ± 00 of 4 0.00Down
S2 cells (growing)6 ± 20 of 4 0.00Down
Whole fly1419 ± 1154 of 4

Looking for FBgn0031654. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime