FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0031675 through 18771 annotations produced 1 hits

(CG9121):

Annotation Number : CG9121
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031675
Gbrowse : chr2L:5048363-5050877 (-) // 100.0 //
Probeset : 1636930_at
Accessions : protein= NP_001162884; /// NP_608901;, nucleotide= NM_001169413; /// NM_135057;
Interpro : 0005200 // structural constituent of cytoskeleton // inferred from sequence or structural similarity /// 0005515 // prot
FlyMine data for FBgn0031675.
Homophila reports that CG9121 is a close match (7e-11) to human gene NOTCH1;TAN1 (NP_060087), a gene associated with Aortic valve disease, 109730 (3);Leukemia, T-cell acute lymphoblastic (2).
BioGrid reports that CG9121 interacts with CG9277 .
VDRC has 2 RNAi stocks for FBgn0031675 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	130 ± 4	4 of 4	23.50	Up
Head	21 ± 2	4 of 4	3.90	Up
Eye	9 ± 1	1 of 4	1.76	None
Thoracicoabdominal ganglion	79 ± 9	4 of 4	14.40	Up
Salivary gland	7 ± 1	0 of 4	1.35	None
Crop	4 ± 0	0 of 4	0.90	None
Midgut	2 ± 0	0 of 4	0.50	None
Tubule	1 ± 0	0 of 4	0.30	Down
Hindgut	2 ± 0	0 of 4	0.40	None
Heart	5 ± 2	1 of 4	0.97	None
Fat body	3 ± 3	0 of 4	0.67	None
Ovary	2 ± 0	0 of 4	0.50	None
Testis	50 ± 1	4 of 4	9.20	Up
Male accessory glands	1 ± 0	0 of 4	0.20	Down
Virgin spermatheca	1 ± 0	0 of 4	0.31	None
Mated spermatheca	2 ± 1	0 of 4	0.48	None
Adult carcass	5 ± 2	0 of 4	0.90	None
Larval CNS	52 ± 4	4 of 4	9.50	Up
Larval Salivary gland	2 ± 1	0 of 4	0.52	None
Larval midgut	3 ± 1	0 of 4	0.55	None
Larval tubule	1 ± 0	0 of 4	0.30	None
Larval hindgut	0 ± 0	0 of 4	0.15	Down
Larval fat body	18 ± 4	1 of 4	3.30	None
Larval trachea	0 ± 0	0 of 4	0.10	Down
Larval carcass	0 ± 0	0 of 4	0.11	Down
S2 cells (growing)	2 ± 0	0 of 4	0.43	None
Whole fly	5 ± 1	1 of 4

Looking for FBgn0031675. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720