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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031698 through 18771 annotations produced 1 hits



(CG14023):

Annotation Number : CG14023
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031698
Gbrowse : chr2L:5317209-5324927 (-) // 100.0 //
Probeset : 1640735_at
Accessions : protein= NP_001097088; /// NP_608921;, nucleotide= NM_001103618; /// NM_135077;
Interpro : 0005488 // binding // inferred from electronic annotation
FlyMine data for FBgn0031698.
TRiP has 1 RNAi stocks for FBgn0031698 available for purchase.
VDRC has 3 RNAi stocks for FBgn0031698 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain39 ± 24 of 4 2.80Up
Head13 ± 32 of 4 1.00None
Eye20 ± 24 of 4 1.47None
Thoracicoabdominal ganglion29 ± 34 of 4 2.10Up
Salivary gland10 ± 40 of 4 0.70None
Crop17 ± 24 of 4 1.20None
Midgut8 ± 20 of 4 0.60None
Tubule4 ± 10 of 4 0.30Down
Hindgut13 ± 13 of 4 0.90None
Heart13 ± 04 of 4 0.98None
Fat body14 ± 31 of 4 1.05None
Ovary32 ± 14 of 4 2.30Up
Testis9 ± 23 of 4 0.70None
Male accessory glands10 ± 41 of 4 0.70None
Virgin spermatheca2 ± 10 of 4 0.15Down
Mated spermatheca1 ± 10 of 4 0.10Down
Adult carcass18 ± 22 of 4 1.30None
Larval CNS29 ± 24 of 4 2.10Up
Larval Salivary gland21 ± 14 of 4 1.49Up
Larval midgut10 ± 10 of 4 0.73None
Larval tubule17 ± 13 of 4 1.20None
Larval hindgut17 ± 24 of 4 1.24None
Larval fat body17 ± 32 of 4 1.20None
Larval trachea20 ± 24 of 4 1.46Up
Larval carcass12 ± 22 of 4 0.85None
S2 cells (growing)40 ± 14 of 4 2.84Up
Whole fly14 ± 04 of 4

Looking for FBgn0031698. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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