FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0031713 through 18771 annotations produced 1 hits

(CG7277):

Annotation Number : CG7277
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031713
Gbrowse : chr2L:5530616-5532195 (-) // 100.0 //
Probeset : 1641134_at
Accessions : protein= NP_608934;, nucleotide= NM_135090;
Interpro : "0004497 // monooxygenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // infe
FlyMine data for FBgn0031713.
BDGP gene expression has embryonic in situ data for CG7277: 13 pix of staining in 7 body parts.
VDRC has 2 RNAi stocks for FBgn0031713 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	196 ± 3	4 of 4	1.20	None
Head	186 ± 15	4 of 4	1.10	None
Eye	188 ± 5	4 of 4	1.14	None
Thoracicoabdominal ganglion	215 ± 6	4 of 4	1.30	Up
Salivary gland	274 ± 13	4 of 4	1.66	Up
Crop	265 ± 5	4 of 4	1.60	Up
Midgut	200 ± 5	4 of 4	1.20	None
Tubule	224 ± 8	4 of 4	1.40	Up
Hindgut	227 ± 5	4 of 4	1.40	Up
Heart	205 ± 7	4 of 4	1.24	None
Fat body	204 ± 17	4 of 4	1.23	None
Ovary	143 ± 6	4 of 4	0.90	None
Testis	201 ± 3	4 of 4	1.20	None
Male accessory glands	233 ± 9	4 of 4	1.40	Up
Virgin spermatheca	189 ± 4	4 of 4	1.14	None
Mated spermatheca	197 ± 12	4 of 4	1.19	None
Adult carcass	304 ± 7	4 of 4	1.80	Up
Larval CNS	167 ± 12	4 of 4	1.01	None
Larval Salivary gland	220 ± 7	4 of 4	1.33	Up
Larval midgut	174 ± 1	4 of 4	1.06	None
Larval tubule	192 ± 10	4 of 4	1.20	None
Larval hindgut	189 ± 8	4 of 4	1.14	None
Larval fat body	119 ± 9	4 of 4	0.70	None
Larval trachea	176 ± 9	4 of 4	1.06	None
Larval carcass	173 ± 12	4 of 4	1.05	None
S2 cells (growing)	281 ± 7	4 of 4	1.70	Up
Whole fly	165 ± 16	4 of 4

Looking for FBgn0031713. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720