FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0031716 through 18771 annotations produced 1 hits

chr2L:5536844-5539169 (-) // 100.0 // ():

Annotation Number : CG14015
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1624834_at
Accessions : protein= , nucleotide= NP_608937;
Pathway : 0008152 // metabolic process // inferred from electronic annotation
FlyMine data for full length.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	325 ± 5	4 of 4	33.00	Up
Head	88 ± 5	4 of 4	9.00	Up
Eye	49 ± 5	4 of 4	4.98	Up
Thoracicoabdominal ganglion	416 ± 14	4 of 4	42.30	Up
Salivary gland	4 ± 2	0 of 4	0.48	None
Crop	1 ± 0	0 of 4	0.20	Down
Midgut	3 ± 0	1 of 4	0.40	Down
Tubule	2 ± 0	0 of 4	0.20	Down
Hindgut	1 ± 0	0 of 4	0.20	Down
Heart	1 ± 0	0 of 4	0.18	Down
Fat body	2 ± 2	0 of 4	0.29	Down
Ovary	0 ± 0	0 of 4	0.10	Down
Testis	1 ± 0	0 of 4	0.10	Down
Male accessory glands	4 ± 2	0 of 4	0.50	None
Virgin spermatheca	4 ± 1	0 of 4	0.41	Down
Mated spermatheca	2 ± 0	0 of 4	0.22	Down
Adult carcass	13 ± 1	2 of 4	1.40	None
Larval CNS	149 ± 23	4 of 4	15.15	Up
Larval Salivary gland	2 ± 1	1 of 4	0.27	Down
Larval midgut	4 ± 1	1 of 4	0.42	Down
Larval tubule	1 ± 0	0 of 4	0.20	Down
Larval hindgut	0 ± 0	0 of 4	0.07	Down
Larval fat body	6 ± 2	0 of 4	0.70	None
Larval trachea	2 ± 2	0 of 4	0.28	Down
Larval carcass	2 ± 0	1 of 4	0.28	Down
S2 cells (growing)	102 ± 6	4 of 4	10.42	Up
Whole fly	9 ± 1	4 of 4

Looking for FBgn0031716. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720