Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

 University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0031723 through 18771 annotations produced 1 hits


(CG7251):

Annotation Number : CG7251
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031723
Gbrowse : chr2L:5587142-5588414 (-) // 100.0 //
Probeset : 1626849_at
Accessions : protein= NP_608944;, nucleotide= NM_135100;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0031723.
BDGP gene expression has embryonic in situ data for CG7251: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0031723 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 10 of 4 0.00Down
Head5 ± 10 of 4 0.00Down
Eye6 ± 01 of 4 0.05Down
Thoracicoabdominal ganglion5 ± 21 of 4 0.00Down
Salivary gland11 ± 30 of 4 0.09Down
Crop6 ± 00 of 4 0.10Down
Midgut13 ± 10 of 4 0.10Down
Tubule3 ± 00 of 4 0.00Down
Hindgut8 ± 10 of 4 0.10Down
Heart4 ± 01 of 4 0.04Down
Fat body5 ± 30 of 4 0.05Down
Ovary3 ± 10 of 4 0.00Down
Testis1432 ± 194 of 412.10Up
Male accessory glands3 ± 10 of 4 0.00Down
Virgin spermatheca2 ± 00 of 4 0.02Down
Mated spermatheca5 ± 00 of 4 0.04Down
Adult carcass6 ± 10 of 4 0.10Down
Larval CNS1 ± 10 of 4 0.02Down
Larval Salivary gland7 ± 00 of 4 0.07Down
Larval midgut11 ± 10 of 4 0.09Down
Larval tubule6 ± 10 of 4 0.10Down
Larval hindgut5 ± 00 of 4 0.05Down
Larval fat body184 ± 1004 of 4 1.60None
Larval trachea8 ± 71 of 4 0.07Down
Larval carcass6 ± 10 of 4 0.05Down
S2 cells (growing)29 ± 04 of 4 0.25Down
Whole fly118 ± 154 of 4

Looking for FBgn0031723. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime