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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0031724 through 18771 annotations produced 1 hits


Annotation Number : CG18266
Flybase ID : FBgn0031724
Gbrowse : chr2L:5596832-5598636 (+) // 100.0 //
Probeset : 1635598_at
Accessions : protein= NP_608945;, nucleotide= NM_135101;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0031724.
BioGrid reports that CG18266 interacts with CG7800 CG18591 CG5675 CG7611 .
VDRC has 1 RNAi stocks for FBgn0031724 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 00 of 4 0.00Down
Head0 00 of 4 0.00Down
Eye2 10 of 4 0.03Down
Thoracicoabdominal ganglion3 10 of 4 0.00Down
Salivary gland11 10 of 4 0.14Down
Crop1 00 of 4 0.00Down
Midgut2 10 of 4 0.00Down
Tubule3 00 of 4 0.00Down
Hindgut1 00 of 4 0.00Down
Heart3 00 of 4 0.04Down
Fat body3 40 of 4 0.04Down
Ovary2 00 of 4 0.00Down
Testis1297 374 of 416.00Up
Male accessory glands3 10 of 4 0.00Down
Virgin spermatheca1 00 of 4 0.01Down
Mated spermatheca2 00 of 4 0.04Down
Adult carcass6 10 of 4 0.10Down
Larval CNS1 00 of 4 0.02Down
Larval Salivary gland3 10 of 4 0.05Down
Larval midgut6 30 of 4 0.08Down
Larval tubule2 00 of 4 0.00Down
Larval hindgut1 00 of 4 0.02Down
Larval fat body136 634 of 4 1.70None
Larval trachea7 22 of 4 0.10Down
Larval carcass4 30 of 4 0.06Down
S2 cells (growing)3 10 of 4 0.04Down
Whole fly80 54 of 4

Looking for FBgn0031724. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime