FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0031740 through 18771 annotations produced 1 hits

(CG7239):

Annotation Number : CG7239
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031740
Gbrowse : chr2L:5802254-5804037 (+) // 100.0 //
Probeset : 1633046_at
Accessions : protein= NP_608960;, nucleotide= NM_135116;
Interpro : 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical i
FlyMine data for FBgn0031740.
BDGP gene expression has embryonic in situ data for CG7239: 4 pix of staining in 1 body parts.
BioGrid reports that CG7239 interacts with CG9776 .
VDRC has 1 RNAi stocks for FBgn0031740 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	98 ± 2	4 of 4	1.70	Up
Head	60 ± 3	4 of 4	1.10	None
Eye	95 ± 6	4 of 4	1.66	Up
Thoracicoabdominal ganglion	83 ± 0	4 of 4	1.50	Up
Salivary gland	54 ± 3	4 of 4	0.95	None
Crop	48 ± 5	4 of 4	0.80	None
Midgut	49 ± 3	4 of 4	0.90	None
Tubule	64 ± 4	4 of 4	1.10	None
Hindgut	57 ± 2	4 of 4	1.00	None
Heart	23 ± 2	4 of 4	0.41	Down
Fat body	26 ± 1	4 of 4	0.45	Down
Ovary	124 ± 7	4 of 4	2.20	Up
Testis	18 ± 2	4 of 4	0.30	Down
Male accessory glands	73 ± 3	4 of 4	1.30	None
Virgin spermatheca	30 ± 1	4 of 4	0.52	Down
Mated spermatheca	32 ± 3	4 of 4	0.57	Down
Adult carcass	40 ± 1	4 of 4	0.70	None
Larval CNS	140 ± 4	4 of 4	2.44	Up
Larval Salivary gland	65 ± 3	4 of 4	1.14	None
Larval midgut	47 ± 2	4 of 4	0.82	None
Larval tubule	42 ± 0	4 of 4	0.70	None
Larval hindgut	66 ± 3	4 of 4	1.15	None
Larval fat body	34 ± 2	3 of 4	0.60	Down
Larval trachea	63 ± 6	4 of 4	1.11	None
Larval carcass	52 ± 1	4 of 4	0.91	None
S2 cells (growing)	123 ± 6	4 of 4	2.15	Up
Whole fly	57 ± 6	4 of 4

Looking for FBgn0031740. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720