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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031775 through 18771 annotations produced 1 hits



chr2L:6067838-6068579 (-) // 100.0 // ():

Annotation Number : CG9150
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1623971_at
Accessions : protein= , nucleotide= NP_608991;
Pathway : 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation reduction // inferred from
FlyMine data for full length.
Homophila reports that CG9150 is a close match (2e-11) to human gene (NP_000851), a gene associated with .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain10 01 of 4 1.80Up
Head76 54 of 413.80Up
Eye508 624 of 491.56Up
Thoracicoabdominal ganglion2 10 of 4 0.50None
Salivary gland7 20 of 4 1.26None
Crop2 00 of 4 0.50None
Midgut3 20 of 4 0.70None
Tubule2 00 of 4 0.40Down
Hindgut2 10 of 4 0.40None
Heart3 01 of 4 0.68None
Fat body1 00 of 4 0.23Down
Ovary1 00 of 4 0.30Down
Testis3 00 of 4 0.60None
Male accessory glands6 10 of 4 1.10None
Virgin spermatheca0 00 of 4 0.15Down
Mated spermatheca2 00 of 4 0.43None
Adult carcass2 00 of 4 0.50None
Larval CNS2 10 of 4 0.41None
Larval Salivary gland2 00 of 4 0.43None
Larval midgut3 10 of 4 0.69None
Larval tubule3 10 of 4 0.50None
Larval hindgut0 00 of 4 0.15Down
Larval fat body5 20 of 4 0.90None
Larval trachea11 111 of 4 2.02None
Larval carcass2 00 of 4 0.41None
S2 cells (growing)1 00 of 4 0.27Down
Whole fly5 11 of 4

Looking for FBgn0031775. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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