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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031802 through 18771 annotations produced 1 hits



pickpocket 7 (ppk7):

Annotation Number : CG9499
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031802
Gbrowse : chr2L:6352323-6354593 (-) // 100.0 //
Probeset : 1638633_at
Accessions : protein= NP_609016;, nucleotide= NM_135172;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0005216 // ion channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // non-tra
FlyMine data for FBgn0031802.
TRiP has 1 RNAi stocks for FBgn0031802 available for purchase.
VDRC has 2 RNAi stocks for FBgn0031802 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 1.00None
Head1 ± 00 of 4 0.80None
Eye3 ± 10 of 4 1.60None
Thoracicoabdominal ganglion1 ± 00 of 4 0.70None
Salivary gland9 ± 30 of 4 4.83None
Crop1 ± 00 of 4 0.90None
Midgut4 ± 10 of 4 2.40None
Tubule3 ± 00 of 4 1.50None
Hindgut3 ± 10 of 4 1.50None
Heart4 ± 20 of 4 2.22None
Fat body6 ± 30 of 4 3.09None
Ovary2 ± 10 of 4 1.30None
Testis1 ± 00 of 4 0.70None
Male accessory glands7 ± 30 of 4 4.10None
Virgin spermatheca1 ± 00 of 4 0.54None
Mated spermatheca1 ± 10 of 4 0.81None
Adult carcass5 ± 20 of 4 2.90None
Larval CNS0 ± 00 of 4 0.47None
Larval Salivary gland1 ± 00 of 4 0.81None
Larval midgut15 ± 20 of 4 7.96Up
Larval tubule2 ± 10 of 4 1.40None
Larval hindgut2 ± 00 of 4 1.29None
Larval fat body1 ± 00 of 4 0.80None
Larval trachea1 ± 20 of 4 0.87None
Larval carcass1 ± 00 of 4 0.82None
S2 cells (growing)1 ± 00 of 4 0.69None
Whole fly2 ± 00 of 4

Looking for FBgn0031802. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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