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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: 16/4/2014: We have just migrated to a new server (the old one ran XP!).
Latest news: Please report unexpected behaviours to julian.dow @ glasgow. ac. uk
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031824 through 18771 annotations produced 1 hits



(CG9547):

Annotation Number : CG9547
Flybase ID : FBgn0031824
Gbrowse : chr2L:6492971-6494527 (-) // 100.0 //
Probeset : 1637142_at
Accessions : protein= NP_609040;, nucleotide= NM_135196;
Pathway : 0005759 // mitochondrial matrix // inferred from sequence or structural similarity /// 0005875 // microtubule associated
Interpro : "0003995 // acyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0004361 // glutaryl-CoA dehydroge
FlyMine data for FBgn0031824.
Homophila reports that CG9547 is a close match (1e-27) to human gene ACADL;LCAD (NP_001599), a gene associated with Acyl-CoA dehydrogenase, long chain, deficiency of, 201460 (3).
BioGrid reports that CG9547 interacts with CG9925 .
VDRC has 1 RNAi stocks for FBgn0031824 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain58 14 of 4 0.30Down
Head206 194 of 4 1.10None
Eye87 164 of 4 0.48Down
Thoracicoabdominal ganglion74 64 of 4 0.40Down
Salivary gland310 64 of 4 1.69Up
Crop99 54 of 4 0.50Down
Midgut128 54 of 4 0.70Down
Tubule1458 1864 of 4 7.90Up
Hindgut229 74 of 4 1.30Up
Heart265 194 of 4 1.44Up
Fat body345 734 of 4 1.88Up
Ovary223 34 of 4 1.20Up
Testis15 04 of 4 0.10Down
Male accessory glands158 124 of 4 0.90None
Virgin spermatheca707 224 of 4 3.85Up
Mated spermatheca416 484 of 4 2.27Up
Adult carcass195 64 of 4 1.10None
Larval CNS63 44 of 4 0.35Down
Larval Salivary gland231 124 of 4 1.26Up
Larval midgut506 354 of 4 2.76Up
Larval tubule646 434 of 4 3.50Up
Larval hindgut244 134 of 4 1.33Up
Larval fat body686 694 of 4 3.70Up
Larval trachea193 134 of 4 1.06None
Larval carcass136 104 of 4 0.74Down
S2 cells (growing)89 14 of 4 0.49Down
Whole fly183 44 of 4

Looking for FBgn0031824. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime