FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0031888 through 18771 annotations produced 1 hits

VEGF-related factor 2 (Pvf2):

Annotation Number : CG13780
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031888
Gbrowse : chr2L:7069577-7084634 (-) // 100.0 //
Probeset : 1630642_at
Accessions : protein= NP_523499;, nucleotide= NM_078775;
Pathway : 0016020 // membrane // inferred from electronic annotation
Interpro : 0005172 // vascular endothelial growth factor receptor binding // inferred from sequence or structural similarity /// 00
FlyMine data for FBgn0031888.
BDGP gene expression has embryonic in situ data for Pvf2: 41 pix of staining in 12 body parts.
BioGrid reports that CG13780 interacts with CG17666 CG17934 CG4328 Dmel CG34168 CG7103 CG31629 .
VDRC has 3 RNAi stocks for FBgn0031888 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 0	4 of 4	0.70	None
Head	15 ± 1	4 of 4	1.70	None
Eye	9 ± 0	4 of 4	1.06	None
Thoracicoabdominal ganglion	2 ± 0	0 of 4	0.30	None
Salivary gland	6 ± 3	1 of 4	0.76	None
Crop	25 ± 2	4 of 4	2.90	Up
Midgut	7 ± 1	3 of 4	0.90	None
Tubule	18 ± 6	2 of 4	2.00	None
Hindgut	15 ± 0	4 of 4	1.80	None
Heart	8 ± 0	4 of 4	0.97	None
Fat body	6 ± 2	2 of 4	0.73	None
Ovary	1 ± 0	0 of 4	0.20	None
Testis	18 ± 0	4 of 4	2.10	Up
Male accessory glands	4 ± 1	1 of 4	0.40	None
Virgin spermatheca	10 ± 1	4 of 4	1.22	None
Mated spermatheca	13 ± 0	4 of 4	1.52	None
Adult carcass	16 ± 1	2 of 4	1.80	None
Larval CNS	38 ± 5	4 of 4	4.30	Up
Larval Salivary gland	84 ± 8	4 of 4	9.41	Up
Larval midgut	10 ± 1	3 of 4	1.13	None
Larval tubule	35 ± 5	4 of 4	3.90	Up
Larval hindgut	22 ± 2	4 of 4	2.47	Up
Larval fat body	10 ± 1	3 of 4	1.20	None
Larval trachea	133 ± 16	4 of 4	14.86	Up
Larval carcass	50 ± 8	4 of 4	5.65	Up
S2 cells (growing)	1509 ± 83	4 of 4	168.14	Up
Whole fly	9 ± 2	4 of 4

Looking for FBgn0031888. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720