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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031912 through 18771 annotations produced 1 hits



Dihydrolipoyllysine-residue acetyltransferase (CG5261):

Annotation Number : CG5261
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031912
Gbrowse : chr2L:7426865-7430329 (+) // 100.0 //
Probeset : 1638067_a_at
Accessions : protein= NP_609118; /// NP_723274;, nucleotide= NM_135274; /// NM_164749;
Pathway : 0005811 // lipid particle // inferred from direct assay /// 0005967 // mitochondrial pyruvate dehydrogenase complex // i
Interpro : 0004742 // dihydrolipoyllysine-residue acetyltransferase activity // inferred from sequence or structural similarity ///
FlyMine data for FBgn0031912.
Homophila reports that CG5261 is a close match (2e-18) to human gene DBT;BCATE2 (NP_001909), a gene associated with Maple syrup urine disease, type II, 248600 (3).
BioGrid reports that CG5261 interacts with CG6576 .
TRiP has 1 RNAi stocks for FBgn0031912 available for purchase.
VDRC has 3 RNAi stocks for FBgn0031912 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1064 ± 284 of 4 1.00None
Head1266 ± 324 of 4 1.10Up
Eye1426 ± 454 of 4 1.28Up
Thoracicoabdominal ganglion1598 ± 384 of 4 1.40Up
Salivary gland1336 ± 104 of 4 1.20Up
Crop1101 ± 384 of 4 1.00None
Midgut689 ± 114 of 4 0.60Down
Tubule2131 ± 674 of 4 1.90Up
Hindgut1598 ± 254 of 4 1.40Up
Heart1923 ± 904 of 4 1.73Up
Fat body2002 ± 1464 of 4 1.80Up
Ovary602 ± 74 of 4 0.50Down
Testis1139 ± 434 of 4 1.00None
Male accessory glands436 ± 84 of 4 0.40Down
Virgin spermatheca2051 ± 784 of 4 1.84Up
Mated spermatheca1782 ± 334 of 4 1.60Up
Adult carcass2672 ± 864 of 4 2.40Up
Larval CNS650 ± 304 of 4 0.58Down
Larval Salivary gland866 ± 204 of 4 0.78Down
Larval midgut639 ± 324 of 4 0.57Down
Larval tubule926 ± 584 of 4 0.80Down
Larval hindgut1399 ± 424 of 4 1.26Up
Larval fat body590 ± 254 of 4 0.50Down
Larval trachea631 ± 144 of 4 0.57Down
Larval carcass1528 ± 1244 of 4 1.37Up
S2 cells (growing)453 ± 24 of 4 0.41Down
Whole fly1115 ± 164 of 4

Looking for FBgn0031912. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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