Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031969 through 18771 annotations produced 1 hits



peste (pes):

Annotation Number : CG7228
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031969
Gbrowse : chr2L:7987104-7994182 (-) // 100.0 //
Probeset : 1634913_s_at
Accessions : protein= NP_001137808; /// NP_723328;, nucleotide= NM_001144336; /// NM_164777;
Pathway : 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electr
Interpro : 0005044 // scavenger receptor activity // non-traceable author statement
FlyMine data for FBgn0031969.
BDGP gene expression has embryonic in situ data for CG7228: 4 pix of staining in 1 body parts.
Homophila reports that CG7228 is a close match (3e-37) to human gene CD36;CHDS7 (NP_001001548), a gene associated with Platelet glycoprotein IV deficiency, 608404 (3);[Macrothrombocytopenia] (1);{Coronary heart disease, susceptibility to, 7}, 610938 (3);{Malaria, cerebral, reduced risk of}, 611162 (3);{Malaria, cerebral, susceptibility to}, 611162 (3).
VDRC has 2 RNAi stocks for FBgn0031969 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain138 34 of 4 0.40Down
Head232 114 of 4 0.70Down
Eye251 94 of 4 0.80Down
Thoracicoabdominal ganglion117 64 of 4 0.40Down
Salivary gland127 54 of 4 0.41Down
Crop129 54 of 4 0.40Down
Midgut769 154 of 4 2.40Up
Tubule243 224 of 4 0.80Down
Hindgut263 64 of 4 0.80None
Heart139 124 of 4 0.44Down
Fat body241 194 of 4 0.77Down
Ovary556 114 of 4 1.80Up
Testis14 24 of 4 0.00Down
Male accessory glands54 44 of 4 0.20Down
Virgin spermatheca105 94 of 4 0.34Down
Mated spermatheca144 144 of 4 0.46Down
Adult carcass181 14 of 4 0.60Down
Larval CNS62 54 of 4 0.20Down
Larval Salivary gland50 14 of 4 0.16Down
Larval midgut876 314 of 4 2.79Up
Larval tubule217 64 of 4 0.70Down
Larval hindgut261 74 of 4 0.83None
Larval fat body184 34 of 4 0.60Down
Larval trachea51 54 of 4 0.16Down
Larval carcass84 174 of 4 0.27Down
S2 cells (growing)624 184 of 4 1.98Up
Whole fly314 194 of 4

Looking for FBgn0031969. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime