FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0031988 through 18771 annotations produced 1 hits

March 2006 (FlyBase/BDGP 5.3) (chr2L:8127023-8133990 (+) // 100.0 //):

Annotation Number : CG8668
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse :
Probeset : 1630841_at
Accessions : protein= , nucleotide=
Interpro : 0006486 // protein glycosylation // inferred from electronic annotation
Homophila reports that CG8668 is a close match (9e-31) to human gene B3GALT3;GLCT3;P (NP_149359), a gene associated with [Blood group, P system], 111400 (3);{Urinary tract infection, susceptibility to} (1).

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	227 ± 2	4 of 4	1.40	Up
Head	106 ± 5	4 of 4	0.70	Down
Eye	118 ± 10	4 of 4	0.75	Down
Thoracicoabdominal ganglion	237 ± 7	4 of 4	1.50	Up
Salivary gland	6739 ± 183	4 of 4	42.71	Up
Crop	186 ± 14	4 of 4	1.20	None
Midgut	203 ± 10	4 of 4	1.30	Up
Tubule	180 ± 23	4 of 4	1.10	None
Hindgut	81 ± 1	4 of 4	0.50	Down
Heart	74 ± 7	4 of 4	0.47	Down
Fat body	60 ± 14	4 of 4	0.38	Down
Ovary	313 ± 4	4 of 4	2.00	Up
Testis	96 ± 7	4 of 4	0.60	Down
Male accessory glands	7 ± 0	1 of 4	0.00	Down
Virgin spermatheca	69 ± 5	4 of 4	0.44	Down
Mated spermatheca	81 ± 12	4 of 4	0.51	Down
Adult carcass	85 ± 4	4 of 4	0.50	Down
Larval CNS	156 ± 11	4 of 4	0.99	None
Larval Salivary gland	299 ± 8	4 of 4	1.90	Up
Larval midgut	454 ± 34	4 of 4	2.88	Up
Larval tubule	395 ± 23	4 of 4	2.50	Up
Larval hindgut	160 ± 8	4 of 4	1.01	None
Larval fat body	61 ± 6	4 of 4	0.40	Down
Larval trachea	109 ± 13	4 of 4	0.70	Down
Larval carcass	179 ± 14	4 of 4	1.14	None
S2 cells (growing)	417 ± 11	4 of 4	2.65	Up
Whole fly	157 ± 5	4 of 4

Looking for FBgn0031988. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720