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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032032 through 18771 annotations produced 1 hits



(CG17294):

Annotation Number : CG17294
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032032
Gbrowse : chr2L:8377050-8378208 (+) // 100.0 //
Probeset : 1623122_at
Accessions : protein= NP_609219;, nucleotide= NM_135375;
Interpro : 0003869 // 4-nitrophenylphosphatase activity // inferred from sequence or structural similarity /// 0003869 // 4-nitroph
FlyMine data for FBgn0032032.
VDRC has 2 RNAi stocks for FBgn0032032 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain176 14 of 4 3.30Up
Head97 24 of 4 1.80Up
Eye131 34 of 4 2.49Up
Thoracicoabdominal ganglion174 94 of 4 3.30Up
Salivary gland103 94 of 4 1.95Up
Crop101 44 of 4 1.90Up
Midgut43 34 of 4 0.80None
Tubule71 14 of 4 1.40Up
Hindgut45 24 of 4 0.90None
Heart121 14 of 4 2.29Up
Fat body95 114 of 4 1.81Up
Ovary78 44 of 4 1.50Up
Testis21 04 of 4 0.40Down
Male accessory glands85 34 of 4 1.60Up
Virgin spermatheca44 34 of 4 0.84None
Mated spermatheca55 34 of 4 1.05None
Adult carcass78 34 of 4 1.50Up
Larval CNS121 74 of 4 2.30Up
Larval Salivary gland106 54 of 4 2.02Up
Larval midgut40 34 of 4 0.77Down
Larval tubule56 34 of 4 1.10None
Larval hindgut44 34 of 4 0.84None
Larval fat body86 94 of 4 1.60Up
Larval trachea135 94 of 4 2.56Up
Larval carcass102 74 of 4 1.93Up
S2 cells (growing)174 64 of 4 3.30Up
Whole fly53 34 of 4

Looking for FBgn0032032. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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