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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032033 through 18771 annotations produced 1 hits



(CG13392):

Annotation Number : CG13392
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032033
Gbrowse : chr2L:8381970-8382707 (-) // 100.0 //
Probeset : 1636190_at
Accessions : protein= NP_609220;, nucleotide= NM_135376;
FlyMine data for FBgn0032033.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain77 ± 14 of 4 0.70Down
Head71 ± 54 of 4 0.70Down
Eye68 ± 44 of 4 0.64Down
Thoracicoabdominal ganglion102 ± 14 of 4 1.00None
Salivary gland128 ± 94 of 4 1.20None
Crop93 ± 54 of 4 0.90None
Midgut86 ± 24 of 4 0.80Down
Tubule154 ± 84 of 4 1.40Up
Hindgut103 ± 14 of 4 1.00None
Heart90 ± 14 of 4 0.85Down
Fat body104 ± 94 of 4 0.97None
Ovary208 ± 84 of 4 1.90Up
Testis40 ± 24 of 4 0.40Down
Male accessory glands100 ± 64 of 4 0.90None
Virgin spermatheca86 ± 44 of 4 0.81Down
Mated spermatheca93 ± 34 of 4 0.87Down
Adult carcass92 ± 34 of 4 0.90Down
Larval CNS94 ± 124 of 4 0.89None
Larval Salivary gland69 ± 24 of 4 0.65Down
Larval midgut51 ± 54 of 4 0.49Down
Larval tubule55 ± 44 of 4 0.50Down
Larval hindgut82 ± 84 of 4 0.77Down
Larval fat body36 ± 34 of 4 0.30Down
Larval trachea57 ± 34 of 4 0.54Down
Larval carcass77 ± 74 of 4 0.72Down
S2 cells (growing)64 ± 24 of 4 0.60Down
Whole fly106 ± 24 of 4

Looking for FBgn0032033. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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