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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032058 through 18771 annotations produced 1 hits



glutactin-like (CG9289):

Annotation Number : CG9289
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032058
Gbrowse : chr2L:8681402-8684350 (-) // 100.0 //
Probeset : 1627969_at
Accessions : protein= NP_609245;, nucleotide= NM_135401;
Interpro : 0004091 // carboxylesterase activity // inferred from sequence or structural similarity /// 0004091 // carboxylesterase
FlyMine data for FBgn0032058.
Homophila reports that CG9289 is a close match (3e-17) to human gene AITD3;TG (NP_003226), a gene associated with Goiter, adolescent multinodular (1);Goiter, nonendemic, simple (3);Hypothyroidism, hereditary congenital (3);{Autoimmune thyroid disease, susceptibility to 3}, 608175 (3).
VDRC has 3 RNAi stocks for FBgn0032058 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 10 of 4 0.40None
Head8 ± 21 of 4 1.90None
Eye2 ± 00 of 4 0.70None
Thoracicoabdominal ganglion5 ± 10 of 4 1.20None
Salivary gland13 ± 30 of 4 3.13None
Crop2 ± 00 of 4 0.60None
Midgut6 ± 00 of 4 1.50None
Tubule5 ± 00 of 4 1.20None
Hindgut3 ± 10 of 4 0.70None
Heart1 ± 00 of 4 0.45None
Fat body5 ± 30 of 4 1.28None
Ovary2 ± 10 of 4 0.60None
Testis4 ± 11 of 4 1.10None
Male accessory glands8 ± 11 of 4 2.10None
Virgin spermatheca4 ± 10 of 4 0.99None
Mated spermatheca3 ± 00 of 4 0.73None
Adult carcass7 ± 10 of 4 1.90None
Larval CNS2 ± 10 of 4 0.63None
Larval Salivary gland4 ± 00 of 4 1.02None
Larval midgut9 ± 11 of 4 2.15None
Larval tubule5 ± 01 of 4 1.30None
Larval hindgut2 ± 10 of 4 0.58None
Larval fat body4 ± 10 of 4 1.00None
Larval trachea2 ± 21 of 4 0.51None
Larval carcass6 ± 11 of 4 1.54None
S2 cells (growing)4 ± 00 of 4 1.01None
Whole fly4 ± 10 of 4

Looking for FBgn0032058. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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