Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032069 through 18771 annotations produced 1 hits



(CG9468):

Annotation Number : CG9468
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032069
Gbrowse : chr2L:8777659-8781251 (-) // 100.0 //
Probeset : 1636395_at
Accessions : protein= NP_609253;, nucleotide= NM_135409;
Pathway : 0005764 // lysosome // inferred from sequence or structural similarity
Interpro : "0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity
FlyMine data for FBgn0032069.
BDGP gene expression has embryonic in situ data for CG9468: 13 pix of staining in 4 body parts.
Homophila reports that CG9468 is a close match (0) to human gene MAN2B1;MANB (NP_000519), a gene associated with Mannosidosis, alpha-, types I and II, 248500 (3).
VDRC has 3 RNAi stocks for FBgn0032069 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 00 of 4 0.00Down
Head1 00 of 4 0.00Down
Eye3 11 of 4 0.01Down
Thoracicoabdominal ganglion2 00 of 4 0.00Down
Salivary gland3 10 of 4 0.01Down
Crop2 10 of 4 0.00Down
Midgut4010 2084 of 4 7.10Up
Tubule3 00 of 4 0.00Down
Hindgut2 00 of 4 0.00Down
Heart0 00 of 4 0.00Down
Fat body2 10 of 4 0.00Down
Ovary0 00 of 4 0.00Down
Testis15 14 of 4 0.00Down
Male accessory glands4 10 of 4 0.00Down
Virgin spermatheca4 10 of 4 0.01Down
Mated spermatheca5 20 of 4 0.01Down
Adult carcass9 30 of 4 0.00Down
Larval CNS1 10 of 4 0.00Down
Larval Salivary gland1 00 of 4 0.00Down
Larval midgut3930 1984 of 4 6.91Up
Larval tubule0 00 of 4 0.00Down
Larval hindgut4 10 of 4 0.01Down
Larval fat body10 20 of 4 0.00Down
Larval trachea0 00 of 4 0.00Down
Larval carcass3 10 of 4 0.01Down
S2 cells (growing)0 00 of 4 0.00Down
Whole fly568 614 of 4

Looking for FBgn0032069. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime