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FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032096 through 18771 annotations produced 1 hits



Odorant receptor 30a (Or30a):

Annotation Number : CG13106
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032096
Gbrowse : chr2L:9111813-9113285 (+) // 100.0 //
Probeset : 1623010_at
Accessions : protein= NP_523520;, nucleotide= NM_078796;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0032096.
VDRC has 1 RNAi stocks for FBgn0032096 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 0.60None
Head2 ± 10 of 4 0.40None
Eye2 ± 00 of 4 0.37None
Thoracicoabdominal ganglion3 ± 10 of 4 0.50None
Salivary gland21 ± 20 of 4 3.60Up
Crop8 ± 20 of 4 1.40None
Midgut6 ± 00 of 4 1.10None
Tubule6 ± 01 of 4 1.10None
Hindgut19 ± 24 of 4 3.30Up
Heart1 ± 00 of 4 0.33None
Fat body18 ± 103 of 4 3.09None
Ovary2 ± 10 of 4 0.40None
Testis4 ± 00 of 4 0.70None
Male accessory glands11 ± 31 of 4 1.90None
Virgin spermatheca4 ± 00 of 4 0.78None
Mated spermatheca6 ± 10 of 4 1.06None
Adult carcass9 ± 20 of 4 1.60None
Larval CNS4 ± 12 of 4 0.75None
Larval Salivary gland5 ± 21 of 4 0.96None
Larval midgut9 ± 00 of 4 1.53None
Larval tubule4 ± 10 of 4 0.70None
Larval hindgut30 ± 34 of 4 5.12Up
Larval fat body7 ± 30 of 4 1.20None
Larval trachea1 ± 00 of 4 0.20None
Larval carcass7 ± 12 of 4 1.17None
S2 cells (growing)4 ± 00 of 4 0.67None
Whole fly6 ± 10 of 4

Looking for FBgn0032096. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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