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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0032127 through 18771 annotations produced 1 hits


Annotation Number : CG13114
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032127
Gbrowse : chr2L:9546043-9547297 (+) // 100.0 //
Probeset : 1625731_at
Accessions : protein= NP_609297;, nucleotide= NM_135453;
FlyMine data for FBgn0032127.
BioGrid reports that CG13114 interacts with CG5494 CG13627 CG13840 CG1391 CG14204 CG15109 CG15737 CG15781 CG17003 CG2865 CG31175 CG31211 CG32016 CG33193 CG3353 CG3858 CG3953 CG4216 CG4303 CG4767 CG5225 CG5358 CG5466 CG6163 CG6240 CG6707 CG7716 CG7835 CG9493 CG33528 CG6246 .
TRiP has 1 RNAi stocks for FBgn0032127 available for purchase.
VDRC has 1 RNAi stocks for FBgn0032127 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain6 11 of 4 0.00None
Head7 10 of 4 0.00None
Eye2 10 of 4 0.01None
Thoracicoabdominal ganglion9 12 of 4 0.00None
Salivary gland17 00 of 4 0.04None
Crop7 10 of 4 0.00None
Midgut9 20 of 4 0.00None
Tubule7 10 of 4 0.00Down
Hindgut7 10 of 4 0.00None
Heart4 21 of 4 0.01None
Fat body7 10 of 4 0.02None
Ovary853 814 of 4 1.90None
Testis3 00 of 4 0.00None
Male accessory glands12 10 of 4 0.00None
Virgin spermatheca5 20 of 4 0.01None
Mated spermatheca6 20 of 4 0.01None
Adult carcass31 211 of 4 0.10None
Larval CNS6 02 of 4 0.01None
Larval Salivary gland12 02 of 4 0.03None
Larval midgut6 20 of 4 0.02None
Larval tubule8 20 of 4 0.00None
Larval hindgut6 10 of 4 0.01None
Larval fat body8 20 of 4 0.00None
Larval trachea2 10 of 4 0.01None
Larval carcass9 00 of 4 0.02None
S2 cells (growing)5 10 of 4 0.01None
Whole fly438 1474 of 4

Looking for FBgn0032127. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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