Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032130 through 18771 annotations produced 1 hits



(CG3838):

Annotation Number : CG3838
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032130
Gbrowse : chr2L:9568891-9573572 (+) // 100.0 //
Probeset : 1629868_s_at
Accessions : protein= NP_609298; /// NP_723469;, nucleotide= NM_135454; /// NM_164859;
Interpro : 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical i
FlyMine data for FBgn0032130.
BDGP gene expression has embryonic in situ data for CG3838: 75 pix of staining in 23 body parts.
BioGrid reports that CG3838 interacts with CG5212 CG6946 CG7669 CG8831 .
TRiP has 2 RNAi stocks for FBgn0032130 available for purchase.
VDRC has 2 RNAi stocks for FBgn0032130 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain79 54 of 4 1.30None
Head56 34 of 4 0.90None
Eye37 34 of 4 0.61Down
Thoracicoabdominal ganglion48 04 of 4 0.80Down
Salivary gland263 84 of 4 4.24Up
Crop158 104 of 4 2.50Up
Midgut62 14 of 4 1.00None
Tubule170 144 of 4 2.70Up
Hindgut81 34 of 4 1.30Up
Heart29 34 of 4 0.48Down
Fat body63 124 of 4 1.03None
Ovary148 44 of 4 2.40Up
Testis14 14 of 4 0.20Down
Male accessory glands208 94 of 4 3.40Up
Virgin spermatheca99 94 of 4 1.61Up
Mated spermatheca98 114 of 4 1.58Up
Adult carcass54 14 of 4 0.90Down
Larval CNS39 64 of 4 0.64Down
Larval Salivary gland216 164 of 4 3.48Up
Larval midgut66 84 of 4 1.08None
Larval tubule59 24 of 4 1.00None
Larval hindgut59 34 of 4 0.96None
Larval fat body17 24 of 4 0.30Down
Larval trachea60 214 of 4 0.98None
Larval carcass18 04 of 4 0.30Down
S2 cells (growing)80 14 of 4 1.29Up
Whole fly62 14 of 4

Looking for FBgn0032130. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime