FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032136 through 18771 annotations produced 1 hits

(CG15828):

Annotation Number : CG15828
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032136
Gbrowse : chr2L:9641349-9656029 (+) // 100.0 //
Probeset : 1628049_at
Accessions : protein= NP_609304; /// NP_995670;, nucleotide= NM_135460; /// NM_205948;
Pathway : 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005875 // microtubule associated
Interpro : 0005319 // lipid transporter activity // inferred from electronic annotation /// 0008289 // lipid binding // inferred fr
FlyMine data for FBgn0032136.
BDGP gene expression has embryonic in situ data for CG15828: 17 pix of staining in 4 body parts.
Homophila reports that CG15828 is a close match (2e-21) to human gene APOB;FLDB (NP_000375), a gene associated with Hypercholesterolemia, due to ligand-defective apo B, 144010 (3);Hypobetalipoproteinemia (3);Hypobetalipoproteinemia, normotriglyceridemic (3).

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	140 ± 5	4 of 4	0.50	Down
Head	875 ± 28	4 of 4	3.00	Up
Eye	543 ± 79	4 of 4	1.87	Up
Thoracicoabdominal ganglion	129 ± 3	4 of 4	0.40	Down
Salivary gland	18 ± 4	1 of 4	0.06	Down
Crop	44 ± 3	4 of 4	0.20	Down
Midgut	7 ± 1	0 of 4	0.00	Down
Tubule	34 ± 9	3 of 4	0.10	Down
Hindgut	105 ± 5	4 of 4	0.40	Down
Heart	1384 ± 50	4 of 4	4.78	Up
Fat body	2684 ± 246	4 of 4	9.26	Up
Ovary	2 ± 1	0 of 4	0.00	Down
Testis	10 ± 1	3 of 4	0.00	Down
Male accessory glands	12 ± 1	0 of 4	0.00	Down
Virgin spermatheca	2079 ± 113	4 of 4	7.18	Up
Mated spermatheca	2395 ± 167	4 of 4	8.27	Up
Adult carcass	1359 ± 74	4 of 4	4.70	Up
Larval CNS	50 ± 6	4 of 4	0.17	Down
Larval Salivary gland	62 ± 10	4 of 4	0.22	Down
Larval midgut	10 ± 1	2 of 4	0.04	Down
Larval tubule	8 ± 1	1 of 4	0.00	Down
Larval hindgut	56 ± 10	4 of 4	0.20	Down
Larval fat body	430 ± 30	4 of 4	1.50	Up
Larval trachea	27 ± 18	4 of 4	0.09	Down
Larval carcass	20 ± 4	4 of 4	0.07	Down
S2 cells (growing)	245 ± 10	4 of 4	0.85	None
Whole fly	289 ± 25	4 of 4

Looking for FBgn0032136. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720