Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032172 through 18771 annotations produced 1 hits



(CG5850):

Annotation Number : CG5850
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032172
Gbrowse : chr2L:9960448-9963769 (-) // 100.0 //
Probeset : 1639519_at
Accessions : protein= NP_001036350; /// NP_609334;, nucleotide= NM_001042885; /// NM_135490;
FlyMine data for FBgn0032172.
BDGP gene expression has embryonic in situ data for CG5850: 14 pix of staining in 6 body parts.
VDRC has 2 RNAi stocks for FBgn0032172 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain148 ± 44 of 4 0.50Down
Head266 ± 114 of 4 1.00None
Eye183 ± 144 of 4 0.66Down
Thoracicoabdominal ganglion157 ± 34 of 4 0.60Down
Salivary gland386 ± 194 of 4 1.39Up
Crop240 ± 154 of 4 0.90None
Midgut139 ± 34 of 4 0.50Down
Tubule371 ± 54 of 4 1.30Up
Hindgut213 ± 34 of 4 0.80Down
Heart392 ± 94 of 4 1.41Up
Fat body593 ± 244 of 4 2.13Up
Ovary422 ± 114 of 4 1.50Up
Testis332 ± 84 of 4 1.20Up
Male accessory glands359 ± 54 of 4 1.30Up
Virgin spermatheca685 ± 154 of 4 2.46Up
Mated spermatheca728 ± 224 of 4 2.61Up
Adult carcass412 ± 74 of 4 1.50Up
Larval CNS164 ± 74 of 4 0.59Down
Larval Salivary gland449 ± 204 of 4 1.61Up
Larval midgut225 ± 74 of 4 0.81Down
Larval tubule591 ± 84 of 4 2.10Up
Larval hindgut258 ± 104 of 4 0.93None
Larval fat body898 ± 544 of 4 3.20Up
Larval trachea277 ± 314 of 4 1.00None
Larval carcass324 ± 184 of 4 1.16None
S2 cells (growing)633 ± 94 of 4 2.27Up
Whole fly278 ± 114 of 4

Looking for FBgn0032172. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime