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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032176 through 18771 annotations produced 1 hits



(CG13127):

Annotation Number : CG13127
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032176
Gbrowse : chr2L:10026739-10029299 (+) // 100.0 //
Probeset : 1629603_at
Accessions : protein= NP_609338;, nucleotide= NM_135494;
FlyMine data for FBgn0032176.
VDRC has 2 RNAi stocks for FBgn0032176 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.10Down
Head2 ± 11 of 4 0.20Down
Eye1 ± 00 of 4 0.12Down
Thoracicoabdominal ganglion1 ± 00 of 4 0.10Down
Salivary gland7 ± 20 of 4 0.49Down
Crop3 ± 11 of 4 0.30Down
Midgut3 ± 11 of 4 0.30Down
Tubule2 ± 00 of 4 0.20Down
Hindgut3 ± 00 of 4 0.20Down
Heart2 ± 00 of 4 0.20Down
Fat body5 ± 00 of 4 0.36Down
Ovary1 ± 00 of 4 0.10Down
Testis175 ± 24 of 412.10Up
Male accessory glands3 ± 10 of 4 0.30Down
Virgin spermatheca4 ± 01 of 4 0.30Down
Mated spermatheca0 ± 00 of 4 0.04Down
Adult carcass8 ± 20 of 4 0.60None
Larval CNS0 ± 00 of 4 0.03Down
Larval Salivary gland1 ± 00 of 4 0.07Down
Larval midgut4 ± 10 of 4 0.29Down
Larval tubule3 ± 11 of 4 0.20Down
Larval hindgut3 ± 00 of 4 0.20Down
Larval fat body22 ± 103 of 4 1.50None
Larval trachea4 ± 32 of 4 0.30Down
Larval carcass2 ± 00 of 4 0.16Down
S2 cells (growing)0 ± 00 of 4 0.04Down
Whole fly14 ± 14 of 4

Looking for FBgn0032176. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime